Hello,
The publication and supplemental material for the metagenomics data and
tools available in Galaxy described in:
Windshield splatter analysis with the Galaxy metagenomic pipeline
is available on the main public Galaxy instance at:
Shared Data - Shared Published Pages - Windshield
Good Morning,
I confirmed with Illumina that my reads are in Sanger FASTQ format and used
edit attributes to change them to fastqsanger. Then I joined the forward
and reverse and ran the FastQ Joiner and the FastQC on the joined data
file. I'm getting the following error:
## odpath=None: No
Hello Lindsey,
Would you please send in a bug report from the FastQC error dataset that
resulted from the run where you included running the Groomer tool first?
This will help us to track down the problem.
Please be sure to leave all datasets in your history for this run
undeleted and in
Hi,
When using the gene BED to codon BED tool, I noticed that it is not
accurately reporting the codons that make up a gene. For example, some of
the codon are missing (particularly ones that span exon-exon junctions.
Also, when changing reading frame from one exon to the next, the codons are
not
Hi Anthony,
There are no known problems with the gene/codon BED tool, but if you
have an example of a problem, I will take a look.
Some items to double check first:
1 - Input is a BED 12 file
2 - Keep in mind that coordinates are 0-based, half-open start, fully
closed end and always
5 matches
Mail list logo
