[galaxy-user] server down?

I am using Galaxy main and my jobs aren't running. They are still grey colored, indicating that they haven't started. I used Galaxy main yesterday just fine. Is something wrong with the server? I tried re-running the jobs, still no progress. -- Rebekah Dedrick, Ph.D. University of Pittsburgh

[galaxy-user] FreeBayes repeated error

Dear Team and Galaxy Users, I have been running FreeBayes on BAM output generated from pooled sequencing of 30 haploid yeast genomes with a total of 90 million reads. I am observing an inconsistent but repeated error using FreeBayes which states: An error occurred running this job:*terminate

Re: [galaxy-user] GFF not recognized in CUFFLINK

Dear Jennifer, My .fasta reference genome is like this: 'gi|289546492|ref|NC_011420.2| Rhodospirillum centenum SW chromosome, complete genome' and in the SAM file generated by BOWTIE it says: @SQ SN:gi|289546492|ref|NC_011420.2|LN:4355543 So I think they are all the same as

[galaxy-user] GeneTrack server error

Hi, I can't connect the GeneTrack server. This is the error message. I tried this a couple times in different days but keeps failing. Firefox can't establish a connection to the server at genetrack.g2.bx.psu.edu. Thank you, ___ The Galaxy

Re: [galaxy-user] Training

Hello Ryan, For upcoming conference and training opportunities, please see our Events calendar: http://wiki.g2.bx.psu.edu/Events If you are interested in hosting a training session at your institution or organization, that can be possible as well. If interested, please send an email to

Re: [galaxy-user] server down?

Hello Rebekah, Are you still experiencing problems? There may have been short delays if the server was very busy, but jobs normally start within 24 hrs even on the busiest days, and today jobs would have been expected to move through much quicker than that. To let you know, 'grey' colored