Hi Kelly,
Thanks much!
Cheers,
Rob
Rob Steele, Ph.D.
Professor
D240 Medical Sciences I
Department of Biological Chemistry
School of Medicine
University of California, Irvine
Irvine, CA 92697-1700
phone: 949-824-7341
e-mail: reste...@uci.edu
fax: 949-824-2688
web: http://polyp.biochem.uci.ed
Hi,
Hydra_JCVI is now available in Galaxy for several tools, including NGS
analysis. Let us know if you run into any problems using it.
Regards,
Kelly
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and ot
Thanks Rob,
This definitely helps - we appreciate the additional info. This is on
our high-priority list and Kelly will get back to you if we have more
questions.
Best,
Jen
On 3/7/11 1:23 PM, Rob Steele wrote:
Hi Jen,
The easiest way to refer to this genome would be Hydra_JCVI. This way we
Hi Jen,
The easiest way to refer to this genome would be Hydra_JCVI. This way
we know it is the JCVI assembly (ABRM). ACZU is a
separate assembly that was done at Berkeley. Including the two
mitochondrial genomes would be a good idea. The many WGS submissions
under ABRM
Hi Rob,
The project ABRM links to several thousand individual WGS
submissions. Are there scaffolds or some type of assembled sequence
available? Or, perhaps there an alternate source?
Also, did you want us to include the two mitochondrial genomes from NCBI
in the main assembly (once
Hi Jen,
How are things progressing with the Hydra genome?
Cheers,
Rob
Rob Steele, Ph.D.
Professor
D240 Medical Sciences I
Department of Biological Chemistry
School of Medicine
University of California, Irvine
Irvine, CA 92697-1700
phone: 949-824-7341
e-mail: reste...@uci.edu
fax: 949-824-26
Hello Rob,
This genome is being worked on right now and should be available soon.
Please feel free to check back a few weeks again for an update if you do
not see it by then.
Thanks!
Jen
Galaxy team
On 2/14/11 3:20 PM, Rob Steele wrote:
Hi Jen et al.,
Sorry to be a pest, but do you have an
Hi Jen et al.,
Sorry to be a pest, but do you have an estimate for when the Hydra
genome will be added to Galaxy?
Cheers,
Rob
Rob Steele, Ph.D.
Professor
D240 Medical Sciences I
Department of Biological Chemistry
School of Medicine
University of California, Irvine
Irvine, CA 92697-1700
phone:
Hello Rob,
We will add this to our to-do list for new genomes. Thanks for sending
the Genbank information!
Next time, if you could send requests to galaxy-user, that would be very
helpful for the team.
Best,
Jen
Galaxy team
On 1/3/11 12:37 PM, Rob Steele wrote:
Hi Jennifer,
Would it be p
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