[galaxy-user] Upload data to local Galaxy by copying them to the file folder

2012-10-12 Thread Jerzy Dyczkowski
Hello, How to put data to the local Galaxy server via ftp, ssh or copying directly to some subfolder in galaxy-dist? We installed a local Galaxy instance and it is running. Manual uploading files from user PCs is slow due to less than perfect connections in the local network. We would

[galaxy-user] cuffdiff values different for same sample

2012-10-12 Thread i b
Hello forum, I have ran cuffdiff with two samples, treated vs untreated, and had certain values as expressed in the output (isoform differential expression). When I ran it again, using a different treated sample, but SAME UNTREATED SAMPLE, the values assigned to the untreated are different. Why

Re: [galaxy-user] Upload data to local Galaxy by copying them to the file folder

2012-10-12 Thread Jennifer Jackson
Hi Jerzy, To load data in batch on a local install, use the Data library function. The admin can do this and you can also grant permissions to specific users. Please see these wiki pages for details: http://wiki.g2.bx.psu.edu/Admin/Data%20Libraries/Libraries