[galaxy-user] (no subject)

2012-04-10 Thread Michael Sikes
Hi, I have hit a brick wall when trying to convert wig files from the GEO to bigwig files. Each time I try (and I have tried many times since October), I get the same error. For example, here is a downloaded wig file, that I assigned to the mouse mm8 genome, and the error I got when I tr

[galaxy-user] wig to bigwig error

2012-04-13 Thread Michael Sikes
Hi, I have hit a brick wall when trying to convert wig files from the GEO to bigwig files. Each time I try (and I have tried many times since October), I get the same error. For example, here is a downloaded wig file, that I assigned to the mouse mm8 genome, and the error I got when I tr

Re: [galaxy-user] wig to bigwig error

2012-04-16 Thread Michael Sikes
any necessary corrections would also be advised. Hopefully this helps! Best, Jen Galaxy team On 4/13/12 6:19 AM, Michael Sikes wrote: Hi, I have hit a brick wall when trying to convert wig files from the GEO to bigwig files. Each time I try (and I have tried many times since October), I get

Re: [galaxy-user] wig to bigwig error

2012-04-16 Thread Michael Sikes
but something like this would work: - Text Manipulation -> "Add column", "1", Iterate? = yes - "Select", "track" - note the line number of track lines - "Remove beginning of a file", using line numbers, and the - original- .wig file, to bre