Hello Hemant,
IDs such as this (resulting from the CASAVA 1.8+ pipeline) work with
most tools. For a few others, there is an open ticket at bitbucket to
track the progress:
https://bitbucket.org/galaxy/galaxy-central/issue/677/update-joiner-tool-to-work-with-casava-18
However, a problem with
It is possible that this question has been asked/answered before. I tried
searching through the galaxy-user list archives on nabble but could not find an
applicable answer.
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Bowtie alignments done using a de-multiplexed Illumina sequence data set
(CASAVA v.1.8.2) appear
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