Re: [galaxy-user] New Genome Load Request

2012-01-26 Thread Mark Guiltinan
Guru Yes please include, in fact they may be all that is needed? They represent the assembled contigs and scaffolds that were linked to the genetic map and this represent the chromosomes... I believe that they contain most of the contigs and scaffolds so there is redundancy. there is one Tc

Re: [galaxy-user] New Genome Load Request

2012-01-26 Thread Guru Ananda
Dear Mark, Sorry for the delay in response. We're wondering whether or not to include pseudomolecules (along with contigs and scaffolds) as genomic sequence for cacao genome. Can you kindly clarify this? Thanks, Guru. On Thu, Oct 27, 2011 at 4:08 PM, Mark Guiltinan wrote: > Hello Galaxy, > >

Re: [galaxy-user] New Genome Load Request

2011-10-27 Thread Jennifer Jackson
Hi Mark, We'll try to get this in ASAP - thank you for sending the source information. When on the Main server, I will send you an update email. Take care, Jen Galaxy team On 10/27/11 1:08 PM, Mark Guiltinan wrote: Hello Galaxy, Would you please perform the following new genome load? Theo

[galaxy-user] New Genome Load Request

2011-10-27 Thread Mark Guiltinan
Hello Galaxy, Would you please perform the following new genome load? Theobroma cacao All the necessary resource files can be found and downloaded at: http://cocoagendb.cirad.fr/gbrowse/download.html Thank you Mark Guiltinan Mark Guiltinan Professor of Plant Molecular Biology Penn State