Peter is correct (I oversimplified)! And Cufflinks does allow for an ID
attribute to span lines as long as it represents the same feature.
To be clear, this error was a true format issue.
The best way to understand the finer points is to see the specification
(also linked from wiki below):
h
On Tue, Jul 31, 2012 at 7:35 PM, Jennifer Jackson wrote:
> Hello Rachel,
>
> When datasets are in a grey "waiting to run" state this indicates that they
> are in the queue and in line to run. For the majority of cases, including
> yours, leaving the job alone and allowing it to run is the correct
Hello Rachel,
When datasets are in a grey "waiting to run" state this indicates that
they are in the queue and in line to run. For the majority of cases,
including yours, leaving the job alone and allowing it to run is the
correct option. The missing metadata only means that the result has not
I am attempting to run Cufflinks on Galaxy main to analyze my E. coli
RNAseq data. I have mapped my reads using an outside program (Genious) and
uploaded the resulting BAM file. I also have uploaded the E. coli
annotations as a gtf file. However when I attempt to run Cufflinks using
my annotatio
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