Hi Rich,
That is consistent with the BED format, that is in "BEDs" 0 based coordinate
system the SNP is at 1056309. In the more common "1" based system this
translates to 1056310. If the end were inclusive the SNP would be at
1056309-1056310 in "BED" world, that is it would take 2 positions.
Hi,
This must seem like a newbie question but I cant get a clear answer. My
understanding from the galaxy wiki
page http://wiki.g2.bx.psu.edu/Learn/FAQ#Learn.2BAC8-FAQ.Interval_and_BED_format
is that all intervals in galaxy are 0 based, start inclusive end exclusive.
but when i use generate
Hello everybody,
I have sequences of small RNA's from 18 to 35nt and accurate trim the
sequences of the adapters before aligning the reads with the reference
genome. Are there any tools available to it in the Galaxy?
Thanks.
--
Thiago Mafra Batista
Biólogo Molecular
Doutorando em Bioinformática
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