FW: [PCORnet CDRN PIs] Invitation: NIH Collaboratory/PCORnet Grand Rounds Featuring Jeff Bro... @ Fri Nov 14, 2014 1pm - 2pm (meeti...@pcornet.org)

2014-11-14 Thread PCORnet Meetings
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Re: [gpc-informatics] #87: Deploy, document R Data Builder demo service

2014-11-14 Thread GPC Informatics
#87: Deploy, document R Data Builder demo service --+ Reporter: dconnolly | Owner: gkowalski Type: task | Status: assigned Priority: major | Milestone: data-agg1 Component: data-sharing | Resolution:

Re: [gpc-informatics] #90: Diagnoses Modifiers for data attribution

2014-11-14 Thread GPC Informatics
#90: Diagnoses Modifiers for data attribution --+ Reporter: campbell | Owner: lv Type: design-issue | Status: accepted Priority: major | Milestone: data-domains2 Component: data-stds | Resolution:

RE: GPC Lab Tree Construction Methodology

2014-11-14 Thread Bos, Angela
AT UTHSCSA our labs currently shown in babel are not correctly mapped from EPIC component IDs. Rather than curate the lab data into categories, we're working on a UMLS meta-thesaurus LOINC implementation, which should be deployed soon. Angela Bos Clinical Informatics Research Division

Re: [gpc-informatics] #90: Diagnoses Modifiers for data attribution

2014-11-14 Thread GPC Informatics
#90: Diagnoses Modifiers for data attribution --+ Reporter: campbell | Owner: dconnolly Type: design-issue | Status: accepted Priority: major | Milestone: data-domains2 Component: data-stds |

RE: GPC Lab Tree Construction Methodology

2014-11-14 Thread Bos, Angela
At UTHSCSA, our preliminary findings seem to show that we get 98% mapping of Clarity component IDs to LOINC using either UMLS meta-thesaurus or UNMC terms (from PCORnet loincv3_unmc_export.csv). -Angela From: gpc-dev-boun...@listserv.kumc.edu [mailto:gpc-dev-boun...@listserv.kumc.edu] On

Re: [gpc-informatics] #71: portable HERON ETL for Epic

2014-11-14 Thread GPC Informatics
#71: portable HERON ETL for Epic -+--- Reporter: dconnolly| Owner: bos Type: enhancement | Status: assigned Priority: major| Milestone: Component: etl-dev | Resolution: Keywords: | Blocked By:

Re: GPC Lab Tree Construction Methodology

2014-11-14 Thread Campbell, James R
So, you are using text analysis and matching? The stats seem unusually high to me. Have you done any manual review for validation? Jim James R. Campbell MD campb...@unmc.edumailto:campb...@unmc.edu Office: 402-559-7505 Secretary: 402-559-7299 Pager: 402-888-1230 On Nov 14, 2014, at 4:53 PM,

RE: [gpc-informatics] #90: Diagnoses Modifiers for data attribution

2014-11-14 Thread Campbell, James R
Phillip What you transcribed is exactly what we agreed at Hackathon I(KU March 2014). Hubert just exposed our modifiers deployed on Babel and we have gone part way on the installation but we are adding a second ontology layer for SNOMED CT. I think that Cerner was researching their problem