Yamur,
It looks like you are feeding a command a directory name, rather than a file
name.
Note also that some files named like *..nii are CIFTI files, rather than NIFTI
files. The ones named like *.nii.gz are typically NIFTI volumes.
Donna
On Jan 21, 2015, at 2:00 PM, Harms, Michael
Hi,
You're going to need to provide more specifics, such as exactly what commands you used.
cheers,
-MH
--
Michael Harms, Ph.D.
---
Conte Center for the Neuroscience of Mental Disorders
Washington University School of Medicine
Hi Greg,
Thank you again for the script below. I am trying to implement it to obtain the
acquisition times for some of the scans, but am running into problems with the
following command:
grep -e 'scans.*rfMRI\'
It seems to hang in my terminal-- am I typing the command correctly?
Thank you!
Sam
On 22/01/2015 7:18 AM, Harms, Michael wrote:
'dcm2nii' is a DICOM to NIFTI converter. Since the HCP doesn't release
the DICOMs, you have no reason to apply it to HCP data.
That is not true, check the documentation.
Dcm2nii also splits 4D Niftis into 3D Niftis and vice versa as well as
'dcm2nii' is a DICOM to NIFTI converter. Since the HCP doesn't release the DICOMs, you have no reason to apply it to HCP data.
As for fslsplit, if you want us to attempt to help you, we need specifics! Namely, the exact command that you tried to run, and the exact file that you tried to run
Thank you Donna I will check it .
On Wed, Jan 21, 2015 at 11:33 PM, Donna Dierker do...@brainvis.wustl.edu
wrote:
Yamur,
It looks like you are feeding a command a directory name, rather than a
file name.
Note also that some files named like *..nii are CIFTI files, rather than
NIFTI files.
