And you’ll need to be specific about any error messages.
Matt.
From:
mailto:hcp-users-boun...@humanconnectome.org>>
on behalf of "Harms, Michael" mailto:mha...@wustl.edu>>
Date: Wednesday, March 13, 2019 at 9:48 AM
To: Lucy Evans
mailto:lucy.ev...@manchester.ac.uk>>,
"hcp-users@humanconnectom
Hi,
Sounds like a coding error. If you’ve converted your T1w and T2w scans to
proper NIFTIs, then you should be able to use those as inputs. Did you review
Examples/Scripts/PreFreeSurferPipelineBatch.sh ?
If you get it working, let us know how the myelin maps look!
Cheers,
-MH
--
Michael Ha
Dear HCPers,
I'm wondering if it's possible to do the structural preprocessing pipelines on
Philips 3T data? I'm trying to run the PreFreeSurfer script and it is not able
to find my T1w or T2w images. These were PAR REC files that I converted to
NIFTI. Could this be the issue or is it more like
