sday, October 31, 2017 at 3:57 PM
To: "Archer,Derek B" <arche...@ad.ufl.edu>
Cc: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org>
Subject: Re: [HCP-Users] Inaccurate b0 Image from DTIFIT
That cannot be the command line as not all the parameters
e: Tuesday, October 31, 2017 at 3:06 PM
To: Matt Glasser <glass...@wustl.edu<mailto:glass...@wustl.edu>>
Subject: RE: [HCP-Users] Inaccurate b0 Image from DTIFIT
Hi Matt –
I am only using one line of code, which is:
dtifit –mask=nodif_brain_mask.nii.gz –bvecs=bvecs –bvals=bvals
–grad
sday, October 31, 2017 at 11:56 AM
To: "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>"
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: [HCP-Users] Inaccurate b0 Image from DTIFIT
Hello all –
I am working on running DTIF
Hello all -
I am working on running DTIFIT on human connectome project diffusion data, but
when I run the code using the gradnonlin option, the b0 image doesn't look
correct.
On a typical b0 image, the ventricles should be bright. The output on all of
my subjects gives me dark ventricles.
