[julia-users] [ANN] Julia v0.4.0-rc2 released

2015-09-22 Thread Elliot Saba
The second release candidate of the 0.4 series is available for download from the usual place . Please test extensively, report issues to the issue tracker for base Julia problems, and report issues with packages to

[julia-users] [ANN] Nettle.jl API breakage

2015-09-21 Thread Elliot Saba
Nettle.jl has just broken its API significantly, in order to be much more precompile-friendly. The big takeaway is that methods such as `md5_hash(data)` should be mapped to `digest("md5", data)`, there are no more auto-generated types for hashes, and

Re: [julia-users] Re: Julia 0.4 RC ppa?

2015-09-20 Thread Elliot Saba
> > On 2015-09-20 20:23, Elliot Saba wrote: > > Yep, Tony hit it on the head. As the maintainer of the Ubuntu PPA, I > definitely understand the usefulness and ease of having Julia managed by > the system package manager, but unfortunately the build process is > relatively

Re: [julia-users] Re: Julia 0.4 RC ppa?

2015-09-20 Thread Elliot Saba
Yep, Tony hit it on the head. As the maintainer of the Ubuntu PPA, I definitely understand the usefulness and ease of having Julia managed by the system package manager, but unfortunately the build process is relatively difficult to debug/fix; we have to jump through quite a few hoops to get our

Re: [julia-users] speed comparison with Mathematica

2015-09-17 Thread Elliot Saba
Because Julia is a just-in-time compiled language, the first time you run something, it gets compiled immediately before running it. Therefore, we suggest you time the execution after "warming up" the JIT: julia> fib(n) = n < 2 ? n : fib(n-1) + fib(n-2) fib (generic function with 1 method)

Re: [julia-users] speed comparison with Mathematica

2015-09-17 Thread Elliot Saba
For further reading, I suggest you check out the the performance section of the manual; it explains all this and more. Welcome to Julia, and because many of these micro benchmarks can be highly dependent on system

Re: [julia-users] Midi.jl - a package for manipulating MIDI data

2015-09-13 Thread Elliot Saba
If you were to name it MIDI, I would suggest putting it in all caps as that's how it's usually stylized, and most of our acronym package names are in all caps. For name discussion, I suggest you just open a pull request to publish your package and ask for feedback on the name, etc... I find your

[julia-users] Julia v0.4.0-rc1 released

2015-09-10 Thread Elliot Saba
The first release candidate of the 0.4 series is available for download from the usual place . Please test extensively, report issues to the issue tracker for base Julia problems, and report issues with packages to their

Re: [julia-users] Re: upgrading from 0.3.11 to 0.4 package

2015-09-04 Thread Elliot Saba
The reason why these is a separation is because there are language constructs in 0.4 that are not available in 0.3, and so packages may have different versions themselves for 0.3 or 0.4. It is therefore not advisable to use the same directory for both 0.3 and 0.4. -E On Fri, Sep 4, 2015 at 9:25

Re: [julia-users] Re: Very poor performance on Linux

2015-08-28 Thread Elliot Saba
: 0.25415 seconds (664 bytes allocated) On Thursday, August 27, 2015 at 1:19:03 PM UTC-4, Elliot Saba wrote: I believe his machine is 64-bit (that's what WORD_SIZE: 64 means in versioninfo() above), he merely has 32 cores. :) -E On Thu, Aug 27, 2015 at 10:05 AM, vav...@uwaterloo.ca wrote

Re: [julia-users] Re: Very poor performance on Linux

2015-08-28 Thread Elliot Saba
, given the time spent in inference (abstract_eval, typeinf_ext, etc.). On Fri, Aug 28, 2015 at 1:02 PM, Elliot Saba staticfl...@gmail.com wrote: Unfortunately I'm not really sure what could be causing the problem here. The best I can think of is to run Julia inside of an external profiler

Re: [julia-users] Re: Very poor performance on Linux

2015-08-27 Thread Elliot Saba
I believe his machine is 64-bit (that's what WORD_SIZE: 64 means in versioninfo() above), he merely has 32 cores. :) -E On Thu, Aug 27, 2015 at 10:05 AM, vava...@uwaterloo.ca wrote: I am probably the wrong person to help with this since I know next to nothing about the internals of Julia,

Re: [julia-users] Re: Very poor performance on Linux

2015-08-26 Thread Elliot Saba
Do other interpreters such as `ipython` run slowly? If you run `strace julia`, it will print out system calls as they execute. Are there certain syscalls that are taking a long amount of time? E.g. does it freeze for a long time on an lstat(), or a read(), or something? -E On Wed, Aug 26, 2015

Re: [julia-users] Re: Very poor performance on Linux

2015-08-26 Thread Elliot Saba
fine. Nothing jumps out at me as taking very long with `strace julia`. Maybe do a lsof/fuser on the sys.so (should be in /usr/lib/julia/ or similar directory) to see if it is actually loaded by julia? (Or if it exists at all) On Wednesday, August 26, 2015 at 2:14:48 PM UTC-4, Elliot Saba

Re: [julia-users] Re: Very poor performance on Linux

2015-08-26 Thread Elliot Saba
Does `top` show that Julia is taking up a huge amount of CPU or memory? -E On Wed, Aug 26, 2015 at 11:49 AM, Chris 7hunderstr...@gmail.com wrote: That gives /home/cbinz/julia/usr/bin/../lib/julia/sys.so On Wednesday, August 26, 2015 at 2:47:06 PM UTC-4, Elliot Saba wrote: After Julia

Re: [julia-users] Very poor performance on Linux

2015-08-26 Thread Elliot Saba
If you open a process manager such as `top`, is there some other process that is hogging your CPU/RAM/disk? -E On Wed, Aug 26, 2015 at 9:49 AM, Isaiah Norton isaiah.nor...@gmail.com wrote: Any ideas? Are you running Julia from an NFS mount? (not a known problem, just a guess) On Wed, Aug

Re: [julia-users] Trouble compiling Julia v0.4

2015-08-21 Thread Elliot Saba
You shouldn't need libiconv installed through Homebrew for Julia, I don't think. Unlink libiconv, delete deps/libgit2 and reinstall. Usually when brew doesn't want to link something, it's for a good reason. -E

Re: [julia-users] Re: Julia nightlies

2015-08-20 Thread Elliot Saba
Hey Uwe, thanks for raising this to our attention. We definitely do suggest using the generic linux binaries for Travis stuff as they're easier for us to control, but I wanted to let you know that the issues with the PPA have been fixed, and you should be good to go now with regards to getting

Re: [julia-users] Re: Splitting a multidimensional function

2015-08-19 Thread Elliot Saba
You may expect the optimizer to completely omit calculating the first element, but unfortunately for you, the negativity check before the square root will never be optimized away, since it affects the whole program execution and thus *shouldn't* be omitted from the compiled program, even though

Re: [julia-users] which gfortran, and thus, which gcc

2015-08-17 Thread Elliot Saba
Hello Federico, I don't think that we are using any features in Julia that rely on GCC newer than 4.8. Although it is possible that the newer GCC releases will know new tricks and can generate slightly faster/more efficient code, I don't think there is a compelling reason to use one over the

Re: [julia-users] which gfortran, and thus, which gcc

2015-08-17 Thread Elliot Saba
: Note that which GCC you use has very little impact on Julia's performance since Julia code is generated by LLVM, regardless of how the C code is compiled. On Mon, Aug 17, 2015 at 3:43 PM, Elliot Saba staticfl...@gmail.com wrote: Hello Federico, I don't think that we are using any features

Re: [julia-users] Re: Package with multiple versions

2015-07-24 Thread Elliot Saba
The time when this could go awry is if you were to update your package to support only 0.3 or only 0.4, then the versions of the package that each version of Julia would attempt to load would be different, resulting in the directory flip-flopping between the 0.3 and 0.4 versions every time you

Re: [julia-users] ANN node-julia 1.2.0

2015-07-09 Thread Elliot Saba
Jeff, your continued dedication to this constantly impresses me. Good work. -E On Thu, Jul 9, 2015 at 1:28 PM, Jeff Waller truth...@gmail.com wrote: A couple of new features with this version Windows support (finally) There were a couple of things preventing this. First off Julia is

Re: [julia-users] Help! Trying to install IJulia on 0.3.10, ZMQ fails to load

2015-06-27 Thread Elliot Saba
What does your Pkg.status() say? -E On Sat, Jun 27, 2015 at 7:05 AM, Scott Jones scott.paul.jo...@gmail.com wrote: *julia * *Pkg.build(IJulia)* *INFO: Building Homebrew*HEAD is now at 13a800c rebar: update 2.6.0 bottle. HEAD is now at 5b3b59a Merge pull request #55 from staticfloat/staging

Re: [julia-users] Re: Julia v0.3.10

2015-06-25 Thread Elliot Saba
Yes, that's my fault. 0.3.10 is making its way through the buildd servers as we speak. -E On Thu, Jun 25, 2015 at 4:52 AM, ele...@gmail.com wrote: On Thursday, June 25, 2015 at 9:11:04 PM UTC+10, Tony Kelman wrote: Yes, I suspect it will, but it may take a week or two for Elliot Saba

Re: [julia-users] libgfortran in a linux install

2015-06-25 Thread Elliot Saba
Hmmm, well, it *should*, so that's worrying that it's not doing so on your system. When you run `make binary-dist`, you the makefile should run a script called `fixup-libgfortran.sh`, which does exactly what you want. Here is an example log

Re: [julia-users] libgfortran in a linux install

2015-06-25 Thread Elliot Saba
/lib/julia/libquadmath.so.0’ Found traces of libgfortran/libgcc in /lib/x86_64-linux-gnu /usr/lib/x86_64-linux-gnu But libgfortran doesn’t appear in the tar file anywhere. make install doesn’t put it in a lib folder anywhere either. On June 25, 2015 at 4:04:23 PM, Elliot Saba (staticfl

Re: [julia-users] libgfortran in a linux install

2015-06-25 Thread Elliot Saba
, but didn’t make it into the tarball. On June 25, 2015 at 5:40:10 PM, Elliot Saba (staticfl...@gmail.com) wrote: So the file /home/vagrant/julia/julia-cb77503114/lib/julia/ libgfortran.so.3 does not exist? -E On Thu, Jun 25, 2015 at 3:18 PM, Sebastian Good sebast...@palladiumconsulting.com

Re: [julia-users] Re: Julia v0.3.10

2015-06-25 Thread Elliot Saba
Who are we kidding, we don't have an application process. We're opensource, the closest we get is contributor guidelines https://github.com/JuliaLang/julia/blob/master/CONTRIBUTING.md. :P -E

Re: [julia-users] Re: Julia v0.3.10

2015-06-25 Thread Elliot Saba
We at the north pole of technical computing *love* elves of all kinds. Applications are open. :) -E On Thu, Jun 25, 2015 at 5:53 PM, ele...@gmail.com wrote: On Friday, June 26, 2015 at 7:04:48 AM UTC+10, Elliot Saba wrote: Yes, that's my fault. 0.3.10 is making its way through the buildd

Re: [julia-users] Re: how to move Julia packages from Ubuntu to OSX?

2015-06-15 Thread Elliot Saba
Congratulations! You have helped me track down a bug in Pango that I inadvertently introduced four days ago! You win the very helpful and patient community member prize. The good news is, this is now fixed

Re: [julia-users] problem adding Winston on OSX 10.10.3

2015-06-15 Thread Elliot Saba
Yes, you are having an unusual amount of trouble. The incorrect permissions in `/usr/local` will definitely screw up your system-wide Homebrew, but it doesn't excuse the lack of `xz` in your `Homebrew.jl`. Please go ahead and open an issue if you continue to have problems. Note that `brew

Re: [julia-users] problem adding Winston on OSX 10.10.3

2015-06-13 Thread Elliot Saba
It definitely should be installed by default. I am sorry you are running into so many issues, Leo! Could you run the following: julia using Homebrew julia Homebrew.add(xz) Then try again? On Sat, Jun 13, 2015 at 5:55 PM, Kevin Squire kevin.squ...@gmail.com wrote: It looks like it's having

Re: [julia-users] Re: how to move Julia packages from Ubuntu to OSX?

2015-06-12 Thread Elliot Saba
a Pkg.update()? This could save some typing. --Peter On Friday, June 12, 2015 at 9:25:54 AM UTC-7, Elliot Saba wrote: Hello K Leo, First off, because many packages use binary dependencies, you shouldn't copy packages from one computer to the other like that; although in principle

Re: [julia-users] how to move Julia packages from Ubuntu to OSX?

2015-06-12 Thread Elliot Saba
I didn't get a screen capture, but I can guess at the problem. This is actually most likely not a Julia problem, but an issue with the system-wide Homebrew packages you have installed outside of Julia. When you call `using Winston`, the julia package Cairo.jl is loaded as well. Cairo.jl looks

Re: [julia-users] Re: how to move Julia packages from Ubuntu to OSX?

2015-06-12 Thread Elliot Saba
Hello K Leo, First off, because many packages use binary dependencies, you shouldn't copy packages from one computer to the other like that; although in principle it shouldn't break anything, you will have a bunch of extra files laying around that your computer doesn't know what to do with, and I

Re: [julia-users] Error with Pkg.add(Cairo)

2015-06-11 Thread Elliot Saba
Could you please Pkg.update() and try again, I believe I have deployed a fix. -E On Thu, Jun 11, 2015 at 1:39 PM, Stepa Solntsev solnt...@gmail.com wrote: More people are having issues... https://github.com/JuliaLang/Homebrew.jl/issues/85 https://github.com/JuliaLang/Cairo.jl/issues/105

Re: [julia-users] Error with Pkg.add(Cairo)

2015-06-06 Thread Elliot Saba
-5, Elliot Saba wrote: Do you have two Julia instances open, trying to install packages at once? The binary dependency manager Homebrew doesn't like to have multiple operations involving the same packages going at once; that's the error you're seeing toward the top of the log. -E On Fri, Jun

Re: [julia-users] Error with Pkg.add(Cairo)

2015-06-05 Thread Elliot Saba
Do you have two Julia instances open, trying to install packages at once? The binary dependency manager Homebrew doesn't like to have multiple operations involving the same packages going at once; that's the error you're seeing toward the top of the log. -E On Fri, Jun 5, 2015 at 11:51 AM, Stepa

Re: [julia-users] 0.3 prereleases should not be tagged.

2015-05-14 Thread Elliot Saba
No problem; what he's referring to is the fact that the version number you've put there, `julia 0.3-` doesn't actually refer to julia 0.3; it refers to a version of Julia that is *before* Julia 0.3, e.g. a 0.3 prerelease. You should get rid of the minus sign, and all will be okay. -E On Thu, May

Re: [julia-users] build errors OSX 10.10.2

2015-04-19 Thread Elliot Saba
Yes, this does seem like something is fishy with BinDeps.jl. The output of Pkg.status() would be helpful here. -E On Saturday, April 18, 2015 at 9:15:07 AM UTC-7, Kevin Squire wrote: Hi Edward, What version of BinDeps.jl is installed? Is this a fresh install of either Julia or those

Re: [julia-users] Re: Julia v0.3.6

2015-03-23 Thread Elliot Saba
Reporting in from a Starbucks in Seoul. :P Because we have make the files owned by root:admin https://github.com/JuliaLang/julia/blob/457ff03d8aeb936e6f3133e8ba3af49733d58ef1/contrib/mac/app/Makefile#L32-L33 to get installs in multi-user environments to work properly, these files can't be

Re: [julia-users] Ipopt.jl won't build

2015-03-02 Thread Elliot Saba
Looks like it's downloading to 1.3.0, when it should be downloading as 1.3.0.tar.gz -E On Mon, Mar 2, 2015 at 7:32 PM, Gabriel Mihalache mihala...@gmail.com wrote: It's trying to download a dependency but the link is broken and it fails. Did anyone manage to find a way around this? Especially

[julia-users] Julia v0.3.6

2015-02-17 Thread Elliot Saba
Hello all! The latest bugfix release of the 0.3.x Julia line has been released. Binaries are available from the usual place http://julialang.org/downloads/, and as is typical with such things, please report all issues to either the issue tracker https://github.com/JuliaLang/julia/issues, or email

Re: [julia-users] Announcing Convex.jl - Convex Optimization in Julia

2015-02-04 Thread Elliot Saba
This is so so cool, Madeleine. Thank you for sharing. I'm a huge fan of DCP, ever since I took a convex optimization course here at the UW (which of course featured cvx and Boyd's book) and seeing this in Julia makes me smile. -E On Wed, Feb 4, 2015 at 5:53 PM, Madeleine Udell

Re: [julia-users] Julia previous versions download

2015-01-15 Thread Elliot Saba
Hello Georgiana. We've moved a lot of the functionality provided by Rmath out into separate packages, such as Distributions.jl, which I believe should host the functionality you're looking for, although I think it's under a different name than `dnorm`. I think something like the following should

Re: [julia-users] github timed out when importing ?

2015-01-13 Thread Elliot Saba
Is it possible for you to include the full log? It's possible there's some more information we need to help you out with this. -E

Re: [julia-users] Error building cairo

2015-01-13 Thread Elliot Saba
@Nolta looks like when the Yum package manager was put in, it remained at `gettext-devel` https://github.com/JuliaLang/Cairo.jl/blob/97efdee18ecf55db74afcca44fcbe3b8dd1696db/deps/build.jl#L73. In any case, this doesn't matter, as it looks like the library is still not being found in the first

[julia-users] Julia v0.3.5

2015-01-09 Thread Elliot Saba
Hello all! The latest bugfix release of the 0.3.x Julia line has been released. Binaries are available from the usual place http://julialang.org/downloads/, and as is typical with such things, please report all issues to either the issue tracker https://github.com/JuliaLang/julia/issues, or

Re: [julia-users] Re: Julia v0.3.5

2015-01-09 Thread Elliot Saba
) The commit and date/time hasn't changed. Cheers Lex On Saturday, January 10, 2015 at 5:11:13 AM UTC+10, Elliot Saba wrote: Hello all! The latest bugfix release of the 0.3.x Julia line has been released. Binaries are available from the usual place http://julialang.org/downloads/, and as is typical

Re: [julia-users] Re: Julia 0.3.4 - problem installing packages

2015-01-08 Thread Elliot Saba
Have you run `Pkg.update()` recently? On Thu, Jan 8, 2015 at 10:34 AM, Test This curiousle...@gmail.com wrote: This might have been because I did not delete ~/.julia. I have not tried yet by deleting it on my Mac. However, I just installed 0.3.4 on Ubuntu and installed the above packages

Re: [julia-users] Re: Switch to version 0.3.4 from 0.4.x on Ubuntu

2015-01-08 Thread Elliot Saba
Yes, because the two packages are named the same, dpkg looks at the 0.4 version number, compares it to the 0.3.4 version number, and decides that 0.4 is newer, and therefore should continue to remain installed. The best way around this is to remove the nightlies repository, add the stable

Re: [julia-users] building ipopt documentation

2015-01-05 Thread Elliot Saba
What is the command you're running to get this output? Also, what does this have to do with ipopt? Can you go through your steps out loud for us, so we can follow along? -E On Mon, Jan 5, 2015 at 6:09 PM, Clas Jacobson clasajacob...@gmail.com wrote: I installed Ipopt and it seems to run fine.

Re: [julia-users] Re: Julia v0.3.4

2014-12-30 Thread Elliot Saba
The Homebrew tap https://github.com/staticfloat/homebrew-julia now has a bottled version of 0.3.4 available. -E On Sun, Dec 28, 2014 at 11:30 PM, i.costi...@me.com wrote: When is v0.3.4 likely to be available on homebrew? On Monday, 29 December 2014 13:30:21 UTC+11, Elliot Saba wrote: All I

Re: [julia-users] Re: Julia v0.3.4

2014-12-28 Thread Elliot Saba
Turns out that after I replaced the library, I neglected to force-replace the digital signature on the whole .app file, so Gatekeeper rejected it. (I had Gatekeeper turned off on my laptop, so it worked fine for me locally). I've reuploaded a new version and tested it with Gatekeeper enabled.

Re: [julia-users] Re: Julia v0.3.4

2014-12-28 Thread Elliot Saba
Are you certain you're using the correct link? This one https://s3.amazonaws.com/julialang/bin/osx/x64/0.3/julia-0.3.4-osx10.7+.dmg, from the main website? -E

Re: [julia-users] Re: Julia v0.3.4

2014-12-28 Thread Elliot Saba
reason it is now working. Sorry if this was a problem at my end - no idea what it could have been. Thanks for the help. Christoph On Sunday, 28 December 2014 19:51:32 UTC, Elliot Saba wrote: Are you certain you're using the correct link? This one https://s3.amazonaws.com/julialang/bin/osx

Re: [julia-users] Re: Julia v0.3.4

2014-12-28 Thread Elliot Saba
All I can think of is that I fixed it and then re-uploaded the old broken .dmg. I'm sorry for all the wasted time here, please try again https://s3.amazonaws.com/julialang/bin/osx/x64/0.3/julia-0.3.4-osx10.7+.dmg, it should work now. -E On Sun, Dec 28, 2014 at 2:50 PM, Stefan Karpinski

Re: [julia-users] Re: Revision release notes

2014-12-26 Thread Elliot Saba
I should point out that although Tony answered your question for looking at 0.3.1 vs. 0.3.0, we are just now releasing 0.3.4, so you can substitute the 0.3.1 with 0.3.4 in the URL linked above for the same effect. -E On Fri, Dec 26, 2014 at 3:03 AM, Tony Kelman t...@kelman.net wrote: We have

[julia-users] Julia v0.3.4

2014-12-26 Thread Elliot Saba
Hello all! The latest bugfix release of the 0.3.X Julia line has been released. Binaries are available from the usual place http://julialang.org/downloads/, and as is typical with such things, please report all issues to either the issue tracker https://github.com/JuliaLang/julia/issues, or

Re: [julia-users] Re: Julia v0.3.4

2014-12-26 Thread Elliot Saba
? On Friday, December 26, 2014 6:43:42 AM UTC-5, Elliot Saba wrote: Hello all! The latest bugfix release of the 0.3.X Julia line has been released. Binaries are available from the usual place http://julialang.org/downloads/, and as is typical with such things, please report all issues to either

Re: [julia-users] Re: Julia v0.3.4

2014-12-26 Thread Elliot Saba
Try again? -E

Re: [julia-users] C code in a Julia package

2014-12-24 Thread Elliot Saba
/24/2014 06:37 AM, Elliot Saba wrote: Hey John, If you can explain a bit as to what you want to do with your libraries, that would help. What I understand from you so far is that: A) You have to C++ libraries that you are able to download and compile Is that correct? -E On Tue

Re: [julia-users] C code in a Julia package

2014-12-24 Thread Elliot Saba
, Elliot Saba wrote: BinDeps is pretty flexible. I'm guessing you have seen a BinDeps invocation that is based off of the Autotools step? (Here's an example for Nettle.jl) That does a lot of things for you, and doesn't really show off the flexibility that well. You can do things in a much more

Re: [julia-users] C code in a Julia package

2014-12-24 Thread Elliot Saba
, since it is just a small piece of wrapper code around them. --John On 12/24/2014 08:17 PM, Elliot Saba wrote: Autotools without a ./configure script can be done by using the MakeTargets buildstep generator. Here's an example for Cairo.jl, where the zlib dependency is built by downloading

Re: [julia-users] C code in a Julia package

2014-12-24 Thread Elliot Saba
` end end),cprimecount, os = :Unix) I't just like the code for Ipopt and other packages except I omit GetSources. I didn't realize that the Build process was also trying to download. I thought this was happening at an earlier stage. --John On 12/24/2014 08:32 PM, Elliot Saba

Re: [julia-users] Can I throw an error in c code just like Rcpp's stop() in Julia

2014-12-24 Thread Elliot Saba
No, I think what is wanted here is an analogue to Rcpp::stop(), which looks like it throws an R error http://stackoverflow.com/questions/24557711/how-to-generate-an-r-warning-safely-in-rcpp from within C/C++ code. I believe the intent here is to generate high-level-language errors from

Re: [julia-users] C code in a Julia package

2014-12-23 Thread Elliot Saba
Hey John, If you can explain a bit as to what you want to do with your libraries, that would help. What I understand from you so far is that: A) You have to C++ libraries that you are able to download and compile B) You want to write a wrapper that sits between Julia and the C++, written in C

Re: [julia-users] How to find the name of the current IJulia notebook

2014-12-22 Thread Elliot Saba
Hey Ben, You can do this by invoking some Javascript to get the notebook name, and then using Javascript to call Julia back again. It's kind of neat. First, in Javascript, you can get this directly via: IPython.notebook.notebook_name You can pull up your browser's javascript console inside an

Re: [julia-users] link error in julia 0.4

2014-12-21 Thread Elliot Saba
What happens if you run `gfortran` from your shell? On Sun, Dec 21, 2014 at 8:50 PM, Sebastian Good sebast...@palladiumconsulting.com wrote: Thanks for the hint. Unfortunately, rebuilding blas etc. results in some errors; the No such file or directory leave me worried. (There's no evidence

Re: [julia-users] Homebrew issue

2014-12-20 Thread Elliot Saba
, 2014 2:18:02 AM UTC+1, Elliot Saba wrote: Failing that, a `Homebrew.rm(hdf5)` followed by a `Homebrew.add(hdf5)` should always get rid of one of those will not force a rebuild of errors. I've just pushed a new version of Homebrew that shouldn't say that anymore, we'll see how it goes. -E

Re: [julia-users] Homebrew issue

2014-12-19 Thread Elliot Saba
Can you do a `Pkg.update()`? I may have just fixed this. -E On Fri, Dec 19, 2014 at 4:55 PM, Tomas Mikoviny tomas.mikov...@gmail.com wrote: sorry this is the repost I've screwed up formatting in previous post... Hi there, I've just got my new Mac and installed the official binary 0.3.3

Re: [julia-users] Homebrew issue

2014-12-19 Thread Elliot Saba
Failing that, a `Homebrew.rm(hdf5)` followed by a `Homebrew.add(hdf5)` should always get rid of one of those will not force a rebuild of errors. I've just pushed a new version of Homebrew that shouldn't say that anymore, we'll see how it goes. -E On Fri, Dec 19, 2014 at 5:16 PM, Elliot Saba

Re: [julia-users] obscure error in Julia 0.3.3

2014-12-16 Thread Elliot Saba
: Mon 27 Jan 2014 09:46:09 PM CETInstall Date : Tue 06 May 2014 05:38:07 PM CESTInstall Reason : Installed as a dependency for another packageInstall Script : NoValidated By : Signature* On Tuesday, December 16, 2014 2:16:10 AM UTC+1, Elliot Saba wrote: If you didn't compile, then ignore

Re: [julia-users] obscure error in Julia 0.3.3

2014-12-15 Thread Elliot Saba
Ah, yes. If you haven't, try a `make -C deps distclean arpack-julia distclean-openblas distclean-suitesparse`, then `make cleanall` and finally `make`. -E On Mon, Dec 15, 2014 at 9:11 AM, João Felipe Santos joao@gmail.com wrote: You may need to clean and rebuild the dependencies as well as

Re: [julia-users] obscure error in Julia 0.3.3

2014-12-15 Thread Elliot Saba
: Where do i need to type all this? I must mention that I did not compile Julia from source, but used my distribution's (arch linux) package manager (pacman). On December 15, 2014 6:15:09 PM CET, Elliot Saba stati...@gmail.com wrote: Ah, yes. If you haven't, try a `make -C deps distclean

Re: [julia-users] BinDeps fails to find a built dependency (but only on Travis)

2014-12-12 Thread Elliot Saba
Just wanted to say that I'm taking a look at this on my own, over here https://travis-ci.org/staticfloat/CasaCore.jl. So far, it looks like libcasacorewrapper is having a hard time finding libcasa_table.so.1, although I can't quite say why yet. -E

Re: [julia-users] BinDeps fails to find a built dependency (but only on Travis)

2014-12-12 Thread Elliot Saba
On Fri, Dec 12, 2014 at 2:18 PM, Elliot Saba staticfl...@gmail.com wrote: Just wanted to say that I'm taking a look at this on my own, over here https://travis-ci.org/staticfloat/CasaCore.jl. So far, it looks like libcasacorewrapper is having a hard time finding libcasa_table.so.1, although I can't

Re: [julia-users] BinDeps fails to find a built dependency (but only on Travis)

2014-12-12 Thread Elliot Saba
Link to debugging info: https://travis-ci.org/staticfloat/CasaCore.jl/builds/43891665 -E On Fri, Dec 12, 2014 at 4:00 PM, Elliot Saba staticfl...@gmail.com wrote: Alright. This looks like it's because there's no RPATH in the libraries that are generated by the BinDeps source build. Here's my

Re: [julia-users] BinDeps fails to find a built dependency (but only on Travis)

2014-12-12 Thread Elliot Saba
into it. On Fri, Dec 12, 2014 at 4:01 PM, Elliot Saba staticfl...@gmail.com wrote: Link to debugging info: https://travis-ci.org/staticfloat/CasaCore.jl/builds/43891665 -E On Fri, Dec 12, 2014 at 4:00 PM, Elliot Saba staticfl...@gmail.com wrote: Alright. This looks like it's because there's no RPATH

Re: [julia-users] BinDeps fails to find a built dependency (but only on Travis)

2014-12-10 Thread Elliot Saba
It would be helpful if you could have julia execute using BinDeps; BinDeps.debug(CasaCore) after attempting to build. It also looks like you have another error that we should look into: Warning: error initializing module GMP: ErrorException(The dynamically loaded GMP library (version 5.0.2

Re: [julia-users] Re: home page content

2014-12-09 Thread Elliot Saba
We're having intermittent DNS issues. http://julialang.org is now up for me however, and I can dig it: (I couldn't, previously) $ dig julialang.org ; DiG 9.8.3-P1 julialang.org ;; global options: +cmd ;; Got answer: ;; -HEADER- opcode: QUERY, status: NOERROR, id: 56740 ;; flags: qr rd ra;

Re: [julia-users] Re: home page content

2014-12-09 Thread Elliot Saba
the variety of things you can do. --Leah On Wed, Dec 10, 2014 at 8:50 AM Elliot Saba staticfl...@gmail.com wrote: We're having intermittent DNS issues. http://julialang.org is now up for me however, and I can dig it: (I couldn't, previously) $ dig julialang.org ; DiG 9.8.3-P1

Re: [julia-users] Re: Why is typeof hex or binary number Uint64, while typeof decimal number is Int64?

2014-12-07 Thread Elliot Saba
What you're getting confused by is that your literals above are still unsigned hex literals; but they are being applied to the negation operator, which doesn't do what you want. In essence, when you type -0x7, it's getting parsed as -(0x7): julia 0x7 0x07 julia -0x7 0xfff9 julia

Re: [julia-users] Julia 0.3.3 fails Base.runtests()

2014-12-03 Thread Elliot Saba
Hey Jeremy, I'm the guy you should be talking to. Can you `brew remove openblas-julia` and then `brew install openblas-julia` and try again? -E On Wed, Dec 3, 2014 at 6:42 AM, Tim Holy tim.h...@gmail.com wrote: Hi Jeremy, Thanks for reporting the problem. Julia's bug reports can be filed

[julia-users] Julia v0.3.3

2014-11-24 Thread Elliot Saba
Hello all! The latest bugfix release of the 0.3.X Julia line has been released. Binaries are available from the usual place http://julialang.org/downloads/, and as usual, please report all issues to either the issue tracker https://github.com/JuliaLang/julia/issues, or email this list. As this

Re: [julia-users] impressions and questions from a Matlab user

2014-11-23 Thread Elliot Saba
Hmmm. Version 0.3.2 will start up faster than 0.3.0, but neither should be taking THAT long, I don't think. What does the following say for you: *julia filter( x - contains(x, sys.dylib), Sys.dllist())* *1-element Array{String,1}:* * /usr/local/Cellar/julia/0.3.2/lib/julia/sys.dylib* If you

Re: [julia-users] 404 on harfbuzz while installing Cairo

2014-11-13 Thread Elliot Saba
Thank you for reporting, should be fixed now. Please Pkg.update() and try again. -E On Thu, Nov 13, 2014 at 11:55 AM, Greg Lee egreg...@gmail.com wrote: Pkg.add(Cairo) fails. Is this a user error or should I file a new issue? == Installing pango dependency: staticfloat/juliadeps/harfbuzz

Re: [julia-users] Re: how to compile julia with nvblas instead of libopenblas

2014-11-12 Thread Elliot Saba
When compiling your Julia, you need to set the following make variables: LIBBLAS=-lnvblas LIBLAPACK=-lnvblas USE_SYSTEM_BLAS=1 USE_SYSTEM_LAPACK=1 I'm assuming that libnvblas provides lapack as well. If it doesn't, you may run into issues because the LAPACK library needs access to BLAS

[julia-users] Re: PSA: Homebrew.jl on OSX Yosemite

2014-11-11 Thread Elliot Saba
I should know better by now than to put time estimates on things like this. The good news is, all the bottles have been built, so please don't hesitate to test things out and report any issues you may run into. As a small aside, I have also bottled Julia proper, so the time required to go from

[julia-users] Re: PSA: Homebrew.jl on OSX Yosemite

2014-11-11 Thread Elliot Saba
I should also point out that support for OSX Lion (10.7) is gradually being phased out. I am following the same deprecation schedule as Homebrew proper, as Homebrew.jl relies quite a bit on the bottles provided by the Homebrew maintainers. -E On Tue, Nov 11, 2014 at 1:58 AM, Elliot Saba staticfl

Re: [julia-users] travis for os x packages

2014-11-10 Thread Elliot Saba
Yep. Essentially, you'll need to enable the osx build environment http://docs.travis-ci.com/user/osx-ci-environment/. It looks like Travis is not accepting http://docs.travis-ci.com/user/multi-os/ more multi-os requests at the moment, so the typical approach, (used on, for instance, the main

Re: [julia-users] Re: Installation commands for Julia/IPython Notbook/Matplotlib on OS X

2014-11-06 Thread Elliot Saba
Yes, starting from scratch, your instructions look great! If you `brew install matplotlib` and don't like it however, running `brew rm matplotlib` and then `pip install matplotlib` should work as well. If `pip` says that `matplotlib` is already installed, you can `pip uninstall matplotlib` to

Re: [julia-users] When or how a distributed array is deallocated?

2014-11-05 Thread Elliot Saba
@Stefan, they do, but we've had a longstanding issue https://github.com/JuliaLang/julia/issues/1339 regarding whether we're releasing it as aggressively as we might need to in order to really shrink the number of pages we've got allocated. In short; calling gc() may not actually reduce the Memory

Re: [julia-users] When or how a distributed array is deallocated?

2014-11-05 Thread Elliot Saba
. function test_allocation() a = drand(1, 1) b = map(x-x+one(x), a) readline() end test_allocation() @everywhere gc() @everywhere Base.flush_gc_msgs() @everywhere gc() readline() On Thursday, November 6, 2014 10:05:21 AM UTC+8, Elliot Saba wrote: @Stefan, they do, but we've

Re: [julia-users] Re: Julia looking for old gfortran after upgrade

2014-11-03 Thread Elliot Saba
Specifically, you need to clean out arpack, suite-sparse, and openblas. These guys use gfortran, which embeds absolute paths to libgfortran. You need to do this every time the gcc version changes. -E On Mon, Nov 3, 2014 at 11:23 AM, James Kyle li...@jameskyle.org wrote: Sometimes you have to

Re: [julia-users] Re: installing julia stable on ubuntu 14.10?

2014-11-03 Thread Elliot Saba
I think this is because the actual package names changed between Ubuntu 14.04 and 14.10. I've added a suite-sparse package of the proper version to the 14.10 PPA, can you please `apt-get update` and try again? On Mon, Nov 3, 2014 at 1:22 PM, Douglas Bates dmba...@gmail.com wrote: Did you add

Re: [julia-users] Re: installing julia stable on ubuntu 14.10?

2014-11-03 Thread Elliot Saba
Great, glad it worked! -E On Mon, Nov 3, 2014 at 1:53 PM, a. kramer ak168...@gmail.com wrote: Just updated -- looks like the dependency issues have been resolved. Thanks for maintaining the PPA! On Monday, November 3, 2014 4:42:25 PM UTC-5, Elliot Saba wrote: I think this is because

Re: [julia-users] Installation on REHL

2014-10-30 Thread Elliot Saba
This was a mistake on my part; the 0.3.2 release that was originally tagged had a typo in it, and the tag was subsequently moved. See this link https://github.com/JuliaLang/julia/commit/8227746b95146c2921f83d2ae5f37ecd146592d8 for the proper gitsha corresponding to the 0.3.2 tag. Finally,

Re: [julia-users] Re: Customize REPL autocomplete

2014-10-29 Thread Elliot Saba
I really like the concept; I can't tell you how many times I've tried to tab-complete dict keys. -E On Wed, Oct 29, 2014 at 1:36 PM, Ivar Nesje iva...@gmail.com wrote: Nice. What do people think about adding this functionality to Base? If anyone likes to read code in a gist, rather than in an

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