[Mauve-users] SNPs finder - draft and complete genomes

2016-08-16 Thread Cristina Kraemer Zimpel
complete genomes. Thank you Best regards. -- Cristina Kraemer Zimpel Médica Veterinária, Especialista em Medicina Veterinária do Coletivo Mestranda em Epidemiologia Experimental Aplicada às Zoonoses Departamento de Medicina Veterinária Preventiva e Saúde Animal (VPS), FMVZ - USP Av. Prof. Dr

[Mauve-users] Progressive alignment - contigs

2016-08-18 Thread Cristina Kraemer Zimpel
Hello I wonder if can I perform progressive alignment with MAUVE using contigs of prokaryotic genomes? I have tried but the analysis just stops, so I think I am using the contigs as input file incorrectly. Can you give some light here? Thank you so much for your time ---

[Mauve-users] Export GAPS

2016-09-20 Thread Cristina Kraemer Zimpel
Hi I performed the progressive alignment with 7 Mycobacterial genomes, and now I am trying to export gaps, unfortunately when I choose this option I have as result an empty file. Can anyone guide me here? Thank you -- Cristina Kraemer Zimpel Médica Veterinária, Especialista em Medicina

Re: [Mauve-users] Export GAPS

2016-09-20 Thread Cristina Kraemer Zimpel
port from the GUI? (I'm not sure if there's a way to > run it from the command line) > Does it give you an error message in the GUI? > What build / version of Mauve are you using? > > ~Joe > > 2016-09-20 7:19 GMT-07:00 Cristina Kraemer Zimpel : > >> >