UPDATE: textproc/py-yaml 3.12

2016-11-12 Thread Jonathan Gray
Index: Makefile
===
RCS file: /cvs/ports/textproc/py-yaml/Makefile,v
retrieving revision 1.14
diff -u -p -r1.14 Makefile
--- Makefile9 Dec 2015 18:26:47 -   1.14
+++ Makefile13 Nov 2016 05:15:05 -
@@ -2,10 +2,9 @@
 
 COMMENT=   YAML parser and emitter in Python
 
-MODPY_EGG_VERSION=3.11
+MODPY_EGG_VERSION=3.12
 DISTNAME=  PyYAML-${MODPY_EGG_VERSION}
 PKGNAME=   py-yaml-${MODPY_EGG_VERSION}
-REVISION=  1
 CATEGORIES=textproc
 
 HOMEPAGE=  http://pyyaml.org/wiki/PyYAML
Index: distinfo
===
RCS file: /cvs/ports/textproc/py-yaml/distinfo,v
retrieving revision 1.4
diff -u -p -r1.4 distinfo
--- distinfo19 Aug 2014 14:25:11 -  1.4
+++ distinfo13 Nov 2016 05:15:12 -
@@ -1,2 +1,2 @@
-SHA256 (PyYAML-3.11.tar.gz) = w2yTiocuX/SUk4szsUqqFWy0OexnVI/Ks1Nbt4sIRug=
-SIZE (PyYAML-3.11.tar.gz) = 248685
+SHA256 (PyYAML-3.12.tar.gz) = WSdmxjAyB6IO/ERVh3eDItf3OxYb2ZTyJ62qNBuiEqs=
+SIZE (PyYAML-3.12.tar.gz) = 253011
Index: patches/patch-lib3_yaml_scanner_py
===
RCS file: patches/patch-lib3_yaml_scanner_py
diff -N patches/patch-lib3_yaml_scanner_py
--- patches/patch-lib3_yaml_scanner_py  1 Dec 2014 09:24:46 -   1.1
+++ /dev/null   1 Jan 1970 00:00:00 -
@@ -1,17 +0,0 @@
-$OpenBSD: patch-lib3_yaml_scanner_py,v 1.1 2014/12/01 09:24:46 jasper Exp $
-
-Security fix for CVE-2014-9130
-http://marc.info/?l=oss-security=141720508007010=2
-
 lib3/yaml/scanner.py.orig  Mon Dec  1 10:14:54 2014
-+++ lib3/yaml/scanner.py   Mon Dec  1 10:15:21 2014
-@@ -299,7 +299,8 @@ class Scanner:
- 
- # A simple key is required only if it is the first token in the 
current
- # line. Therefore it is always allowed.
--assert self.allow_simple_key or not required
-+# http://marc.info/?l=oss-security=141720508007010=2
-+#assert self.allow_simple_key or not required
- 
- # The next token might be a simple key. Let's save it's number and
- # position.
Index: patches/patch-lib_yaml_scanner_py
===
RCS file: patches/patch-lib_yaml_scanner_py
diff -N patches/patch-lib_yaml_scanner_py
--- patches/patch-lib_yaml_scanner_py   1 Dec 2014 09:24:46 -   1.1
+++ /dev/null   1 Jan 1970 00:00:00 -
@@ -1,17 +0,0 @@
-$OpenBSD: patch-lib_yaml_scanner_py,v 1.1 2014/12/01 09:24:46 jasper Exp $
-
-Security fix for CVE-2014-9130
-http://marc.info/?l=oss-security=141720508007010=2
-
 lib/yaml/scanner.py.orig   Wed Mar 26 19:54:13 2014
-+++ lib/yaml/scanner.pyMon Dec  1 10:15:36 2014
-@@ -299,7 +299,8 @@ class Scanner(object):
- 
- # A simple key is required only if it is the first token in the 
current
- # line. Therefore it is always allowed.
--assert self.allow_simple_key or not required
-+# http://marc.info/?l=oss-security=141720508007010=2
-+#assert self.allow_simple_key or not required
- 
- # The next token might be a simple key. Let's save it's number and
- # position.



UPDATE: textproc/lua-yaml 6.1

2016-11-12 Thread Jonathan Gray
Index: Makefile
===
RCS file: /cvs/ports/textproc/lua-yaml/Makefile,v
retrieving revision 1.2
diff -u -p -r1.2 Makefile
--- Makefile16 Oct 2016 23:21:23 -  1.2
+++ Makefile13 Nov 2016 05:12:28 -
@@ -1,7 +1,7 @@
 # $OpenBSD: Makefile,v 1.2 2016/10/16 23:21:23 jca Exp $
 
 COMMENT =  Lua library for parsing and emitting YAML
-V =6.0
+V =6.1
 
 PKGNAME =  lua-yaml-${V}
 
Index: distinfo
===
RCS file: /cvs/ports/textproc/lua-yaml/distinfo,v
retrieving revision 1.1.1.1
diff -u -p -r1.1.1.1 distinfo
--- distinfo24 Apr 2016 02:36:45 -  1.1.1.1
+++ distinfo13 Nov 2016 05:12:40 -
@@ -1,2 +1,2 @@
-SHA256 (lyaml-release-v6.0.tar.gz) = 
nXz3TXdpmf9vdYxWnVIC/12h8wPG9CKdO0H3HNOj56c=
-SIZE (lyaml-release-v6.0.tar.gz) = 475288
+SHA256 (lyaml-release-v6.1.tar.gz) = 
cGPlDfzuJfh/Gin8LXXRLl2P2DUiqZk21RhBw/N0hRo=
+SIZE (lyaml-release-v6.1.tar.gz) = 476721



UPDATE: devel/libyaml 0.1.7

2016-11-12 Thread Jonathan Gray
https://bitbucket.org/xi/libyaml/raw/6d5f97d2330147c286839bacfa0c66fac3992faf/announcement.msg

* Fixed segfault in yaml_string_write_handler.
* Fixed invalid simple key assertion.
* Fixed error handling in some examples (thank to Mathias Svensson).
* Removed obsolete VS project files.

Index: Makefile
===
RCS file: /cvs/ports/devel/libyaml/Makefile,v
retrieving revision 1.11
diff -u -p -r1.11 Makefile
--- Makefile11 Mar 2016 19:59:13 -  1.11
+++ Makefile13 Nov 2016 04:58:16 -
@@ -2,8 +2,7 @@
 
 COMMENT=   YAML 1.1 parser and emitter written in C
 
-DISTNAME=  yaml-0.1.6
-REVISION=  1
+DISTNAME=  yaml-0.1.7
 PKGNAME=   lib${DISTNAME}
 CATEGORIES=devel
 
Index: distinfo
===
RCS file: /cvs/ports/devel/libyaml/distinfo,v
retrieving revision 1.5
diff -u -p -r1.5 distinfo
--- distinfo30 Mar 2014 06:59:49 -  1.5
+++ distinfo13 Nov 2016 04:59:16 -
@@ -1,2 +1,2 @@
-SHA256 (yaml-0.1.6.tar.gz) = faaXG0vQipht0qYTU7xCI2K9DtzGfX66rGjJX3QYJ0k=
-SIZE (yaml-0.1.6.tar.gz) = 503012
+SHA256 (yaml-0.1.7.tar.gz) = gIjkVyZKmLpFGpC4Zh/LT51vR49yZdSDIqGWzsJIByk=
+SIZE (yaml-0.1.7.tar.gz) = 527518
Index: patches/patch-src_scanner_c
===
RCS file: patches/patch-src_scanner_c
diff -N patches/patch-src_scanner_c
--- patches/patch-src_scanner_c 1 Dec 2014 08:48:51 -   1.4
+++ /dev/null   1 Jan 1970 00:00:00 -
@@ -1,21 +0,0 @@
-$OpenBSD: patch-src_scanner_c,v 1.4 2014/12/01 08:48:51 jasper Exp $
-
-Security fix for CVE-2014-9130
-https://marc.info/?l=oss-security=141715462623662=2
-
 src/scanner.c.orig Thu Mar 27 05:54:02 2014
-+++ src/scanner.c  Sat Nov 29 16:10:33 2014
-@@ -1106,13 +1106,6 @@ yaml_parser_save_simple_key(yaml_parser_t *parser)
- && parser->indent == (ptrdiff_t)parser->mark.column);
- 
- /*
-- * A simple key is required only when it is the first token in the current
-- * line.  Therefore it is always allowed.  But we add a check anyway.
-- */
--
--assert(parser->simple_key_allowed || !required);/* Impossible. */
--
--/*
-  * If the current position may start a simple key, save it.
-  */
- 



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Juan Francisco Cantero Hurtado
CVSROOT:/cvs
Module name:ports
Changes by: juan...@cvs.openbsd.org 2016/11/12 19:30:23

Modified files:
archivers/zstd : Makefile distinfo 
archivers/zstd/patches: patch-tests_playTests_sh 

Log message:
Update to zstd 1.1.1.



Re: UPDATE: devel/doxygen

2016-11-12 Thread Jeremie Courreges-Anglas
Nigel Taylor  writes:

> On 10/22/16 16:42, Rafael Sadowski wrote:
>> On Tue Sep 20, 2016 at 01:33:34AM +0100, Stuart Henderson wrote:
>>> These plist changes for every update are getting silly, I think I'd
>>> rather disable doxygen in those ports..
>>>
>> 
>> Other opinions or agreements?
>> 
>
> I don't build qt5/kde4/kde5 for amd64.
>
> From what I see, the -gui and hence inclusion qt5 has no point it
> doesn't appear to be used in other ports. If no one actually uses the
> -gui spending a lot of time building qt5 / and -gui for nothing.
>
> Because of the size of qt5 this should be split into two ports, rather
> than using the PSEUDO_FLAVOR otherwise all the ports listed will be
> waiting on the qt5 build to complete when using dpb.
>
> qt5 itself needs splitting using the separate source files provided,
> rather then the combined file with everything needed or not.
>
> As is I will be just removing -gui / PSEUDO_FLAVOR from the port for myself.

Instead of people having to maintain local patches, wouldn't it be
better to remove qt5 from this build path?  That can surely be done
without killing the -gui package.

> The same way I have removed kde4 from editors/libreoffice, qt, qt4, qt5
> from print/poppler.

> The PLIST issue is gnerating html documentation with changed scripts,
> images, with the same names
>
>
> also as far as I can see there is an option to force the use of Qt4 if
> Qt5 is present.
>
> From doxygen install document it says...
>
> Qt Software's GUI toolkit
> http://qt-project.org/;>Qt
> \addindex Qt
> version 4.3 or higher (but currently, Qt 5.x is not yet supported).
> This is needed to build the GUI front-end doxywizard.
>
> I searched the changelog not a single mention of a switch to Qt5
>
> This looks like we are switching to Qt5 because it being built / test on
> a machine with Qt5 installed else the switch to Qt5 hasn't been documented.
>
> So why is this even using Qt5.

Upstream made the choice of introducing Qt5 compatibility in this
release, and to use Qt5 by default.  doxywizard runs fine here.
To me it looks like a case of slightly outdated information on the
website.

Note that this diff has been floating on the mailing-list since some
time already, you could have voiced objections earlier. ;)

-- 
jca | PGP : 0x1524E7EE / 5135 92C1 AD36 5293 2BDF  DDCC 0DFA 74AE 1524 E7EE



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Jeremie Courreges-Anglas
CVSROOT:/cvs
Module name:ports
Changes by: j...@cvs.openbsd.org2016/11/12 14:18:05

Modified files:
net/openvpn-auth-ldap: Makefile 

Log message:
Enable tests.



Re: UPDATE: devel/doxygen

2016-11-12 Thread Nigel Taylor
On 10/22/16 16:42, Rafael Sadowski wrote:
> On Tue Sep 20, 2016 at 01:33:34AM +0100, Stuart Henderson wrote:
>> These plist changes for every update are getting silly, I think I'd
>> rather disable doxygen in those ports..
>>
> 
> Other opinions or agreements?
> 

I don't build qt5/kde4/kde5 for amd64.

>From what I see, the -gui and hence inclusion qt5 has no point it
doesn't appear to be used in other ports. If no one actually uses the
-gui spending a lot of time building qt5 / and -gui for nothing.

Because of the size of qt5 this should be split into two ports, rather
than using the PSEUDO_FLAVOR otherwise all the ports listed will be
waiting on the qt5 build to complete when using dpb.

qt5 itself needs splitting using the separate source files provided,
rather then the combined file with everything needed or not.

As is I will be just removing -gui / PSEUDO_FLAVOR from the port for myself.

The same way I have removed kde4 from editors/libreoffice, qt, qt4, qt5
from print/poppler.

The PLIST issue is gnerating html documentation with changed scripts,
images, with the same names


also as far as I can see there is an option to force the use of Qt4 if
Qt5 is present.

>From doxygen install document it says...

Qt Software's GUI toolkit
http://qt-project.org/;>Qt
\addindex Qt
version 4.3 or higher (but currently, Qt 5.x is not yet supported).
This is needed to build the GUI front-end doxywizard.

I searched the changelog not a single mention of a switch to Qt5

This looks like we are switching to Qt5 because it being built / test on
a machine with Qt5 installed else the switch to Qt5 hasn't been documented.

So why is this even using Qt5.


>>
>>
>> On 2016/09/19 21:38, Rafael Sadowski wrote:
>>> Hi ports@
>>>
>>> updated again. Doxygen port changes:
>>>
>>> - Switch to qt5
>>> -- Build doxyapp, doxyindexer applications (Tested @amd64)
>>> - Some patches are no longer needed (committed upstream)
>>> - Take Maintainer
>>>
>>> I checked all ports with doxygen usage:
>>>
>>> devel/libmtpREVISION bump and updated plist
>>> devel/qjson REVISION bump and updated plist
>>> geo/geosREVISION bump and updated plist, switch 
>>> HOMEPAGE to HTTPS
>>> graphics/lensfunREVISION bump and updated plist
>>> multimedia/libquicktime REVISION bump and updated plist
>>> x11/dbusmenu-qt REVISION bump and updated plist
>>> x11/ede/lib REVISION bump and updated plist
>>> net/ortpREVISION bump and updated plist
>>>
>>> databases/soprano   none plist changes
>>> devel/kf5/kapidox   none plist changes
>>> devel/libidnnone plist changes
>>> devel/simulavr  none plist changes
>>> devel/tclap none plist changes
>>> graphics/digikam-kde4   none plist changes
>>> graphics/opencv none plist changes
>>> math/ginac  none plist changes
>>> net/libktorrent none plist changes
>>> net/libmygpo-qt none plist changes
>>> productivity/kmymoney   none plist changes
>>> productivity/libalkimia none plist changes
>>> x11/awesome none plist changes
>>> x11/gtk3mm  none plist changes
>>> x11/kde4/nepomuk-core   none plist changes
>>> x11/kde4/runtimenone plist changes
>>>
>>> devel/cppunit/Makefile  disable-doxygen
>>> devel/kyua-cli  without-doxygen
>>> devel/kyua-testers  without-doxygen
>>> devel/libhidw   without-doxygen
>>> devel/rapidsvn  with-doxygen=no
>>> graphics/geeqie disable-doxygen-doc
>>> graphics/libpgf Force disabling documentation 
>>> generation through doxygen
>>> multimedia/libbluraydisable-doxygen-doc
>>> multimedia/libv4l   disable-doxygen-doc
>>> net/avahi   disable-doxygen-doc
>>> net/meanwhile   enable-doxygen=no
>>> net/pidgin  disable-doxygen
>>> productivity/gnucashdisable-doxygen
>>> sysutils/inotify-tools  disable-doxygen
>>> x11/dbusdisable-doxygen-docs
>>> x11/libxdg-basedir  disable-doxygen-doc
>>> x11/xkbcommon   without-doxygen
>>>
>>> Tested only on amd64. I am looking forward about your feedback and I hope we
>>> will see 1.8.12 quickly in the tree.
>>>
>>> Kind regards,
>>>
>>> Rafael Sadowski
>>>
>>>
>>>
>>> Index: devel/doxygen/Makefile
>>> ===
>>> RCS file: /cvs/ports/devel/doxygen/Makefile,v
>>> retrieving revision 1.35
>>> diff -u -p -u -p -r1.35 Makefile
>>> --- devel/doxygen/Makefile  28 Apr 2016 17:55:27 -  1.35
>>> +++ devel/doxygen/Makefile  18 Sep 2016 15:13:38 -
>>> @@ 

CVS: cvs.openbsd.org: ports

2016-11-12 Thread Jeremie Courreges-Anglas
CVSROOT:/cvs
Module name:ports
Changes by: j...@cvs.openbsd.org2016/11/12 14:17:02

Modified files:
net/openvpn-auth-ldap: Makefile 
Added files:
net/openvpn-auth-ldap/patches: patch-src_Makefile_in 
   patch-tests_Makefile_in 

Log message:
Ensure that we link against libobjc.so from base.

Newer libobjc from ports isn't compatible.  Problem reported by
Sebastien Leclerc.



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Jeremie Courreges-Anglas
CVSROOT:/cvs
Module name:ports
Changes by: j...@cvs.openbsd.org2016/11/12 13:59:18

Modified files:
devel/doxygen  : Makefile 

Log message:
Don't try to build the gui on powerpc, qt5 doesn't build there.



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Jeremie Courreges-Anglas
CVSROOT:/cvs
Module name:ports
Changes by: j...@cvs.openbsd.org2016/11/12 13:54:09

Modified files:
geo/geos   : Makefile 

Log message:
Switch HOMEPAGE to https://

>From Rafael Sadowski, as part of a larger diff.



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Jeremie Courreges-Anglas
CVSROOT:/cvs
Module name:ports
Changes by: j...@cvs.openbsd.org2016/11/12 13:50:41

Modified files:
audio/libnjb   : Makefile 
audio/libnjb/pkg: PLIST 
devel/doxygen  : Makefile distinfo 
devel/doxygen/patches: patch-addon_doxywizard_CMakeLists_txt 
   patch-libmd5_libmd5_pro_in 
   patch-qtools_qtools_pro_in 
   patch-src_CMakeLists_txt 
   patch-src_dirdef_cpp 
devel/doxygen/pkg: PLIST-main 
devel/libmtp   : Makefile 
devel/libmtp/pkg: PLIST 
devel/qjson: Makefile 
devel/qjson/pkg: PLIST 
geo/geos   : Makefile 
geo/geos/pkg   : PLIST 
graphics/lensfun: Makefile 
graphics/lensfun/pkg: PLIST 
multimedia/libquicktime: Makefile 
multimedia/libquicktime/pkg: PLIST 
net/ortp   : Makefile 
net/ortp/pkg   : PLIST 
x11/dbusmenu-qt: Makefile 
x11/dbusmenu-qt/pkg: PLIST 
x11/ede/lib: Makefile 
x11/ede/lib/pkg: PLIST 

Log message:
Update to doxygen-1.8.12 and switch the gui to Qt5

>From Rafael Sadowski, who takes maintainership.



Re: New: biology/hmmer

2016-11-12 Thread Senthil Kumar M


On Sat, 12 Nov 2016, Jeremie Courreges-Anglas wrote:

> Senthil Kumar M  writes:
> 
> > Hello ports,
> >
> > HMMER is used for searching sequence databases for sequence homologs,
> > and for making sequence alignments. It implements methods using
> > probabilistic models called profile hidden Markov models (profile
> > HMMs).  (http://hmmer.org)
> >
> > The latest version 3.1b2 compiles and builds without any additional
> > patches/errors on OpenBSD, unlike previous versions (see: `h104'
> > on:
> > https://raw.githubusercontent.com/EddyRivasLab/hmmer/master/documentation/bugs/BUGTRAX
> > .
> >
> > HMMER is an indispensable tool for bioinformatics research and it
> > would be neat to have it available on OpenBSD.
> >
> > I have tested this on amd64, additional tests, comments are welcome.
> 
> Here's a updated tarball with the following changes:
> - more spacing in Makefile
> - move PKGNAME to hmmer-3.1beta2, per packages-specs(7)
> - I added your name to the mail address in MAINTAINER
> - "License GPLv3 only": "GPLv3" is enough, else it would be "GPLv3+"
> - make V=1 to show build commands
> - disable sse(2) except on amd64
> - kill last paragraph in DESCR, trim the third one and merge it with the
>   first one.  Those bits didn't seem particularly relevant for a package
>   description
> 
> Looks good to me as is.  Are the executables in this package useful
> alone, or do you use it only for the library?
> 
> 

Hi Jeremie,

Thank you so much for taking time to look into this and your inputs. I 
checked the updated tarball on amd64 (running Nov. 9 snapshot) and it 
works (installs and runs) as expected.

The executables in this package are useful by themselves. 

Senthil



NEW: math/py-bottleneck 1.2.0

2016-11-12 Thread Alexandr Shadchin
Hi,

ok to import?

DESCR:

Bottleneck is a collection of fast NumPy array functions written in C.

-- 
Alexandr Shadchin



py-bottleneck.tgz
Description: application/tar-gz


update devel/cargo to 0.14.0

2016-11-12 Thread Sebastien Marie
Hi,

The problem of crates.io has been resolved by upstream (problematic
commit has been reverted), so we are free to remove BROKEN now.

While here, upgrade cargo :)

Regarding the diff, a license clarification has been done: hamcrest part
is MIT/Apache 2.0, and a new release (with proper license) has been
released. So I updated the license indications and PERMIT_DISTFILES_FTP.

Same as rust, I would like to take back the maintenership.

Thanks.
-- 
Sebastien Marie

Index: Makefile
===
RCS file: /cvs/ports/devel/cargo/Makefile,v
retrieving revision 1.5
diff -u -p -r1.5 Makefile
--- Makefile12 Nov 2016 08:53:11 -  1.5
+++ Makefile12 Nov 2016 19:08:40 -
@@ -1,21 +1,19 @@
 # $OpenBSD: Makefile,v 1.5 2016/11/12 08:53:11 landry Exp $
 COMMENT = package manager for Rust language
 
-BROKEN = crates.io requires Accept: HTTP header
-
 # cargo version
-CARGO_VERSION =0.13.0
+CARGO_VERSION =0.14.0
 
 # rust-install submodule version in cargo/src/rust-installer
 # see https://github.com/rust-lang/cargo/tree/${CARGO_VERSION}/src
-RUSTINSTALL_INDEX =c37d3747da75c280237dc2d6b925078e69555499
+RUSTINSTALL_INDEX =4f994850808a572e2cc8d43f968893c8e942e9bf
 
 # crates.io commit for CARGO_VERSION
 # see https://github.com/rust-lang/crates.io-index/commits/master/ca/rg/cargo
-CRATESIO_INDEX =   2e1f891403b2d057f0ea21475b1bb99800aa14b6
+CRATESIO_INDEX =   9f8c3a65f70b2a5723e0d9cc0a32d531ea42da67
 
 # cargo version used for bootstrapping
-BOOTSTRAP_VERSION =0.12.0-20160821
+BOOTSTRAP_VERSION =0.14.0-20161112
 
 # registry index
 # see ${WRKDIR}/cargo-home/registry/index/github.com-${REGISTRY_INDEX}
@@ -27,19 +25,15 @@ CATEGORIES =devel
 
 HOMEPAGE = https://doc.crates.io/
 
+MAINTAINER =   Sebastien Marie <sema...@online.fr>
+
 # cargo is dual licensed MIT/Apache-2.0
 # third-parties (detail below):
 #  - MIT
 #  - Unlicense/MIT
 #  - MIT/Apache-2.0
-#  - MPL-2.0
-#  - one with no indication of licence (hamcrest)
-#
-# hamcrest is used only for the testsuite, and isn't builded with cargo.
-# so the package doesn't contain it.
 #
 PERMIT_PACKAGE_CDROM = Yes
-PERMIT_DISTFILES_FTP = No as hamcrest has no license information
 
 WANTLIB = c crypto curl m pthread ssh2 ssl z
 
@@ -52,55 +46,57 @@ DISTFILES +=crates.io-index-${CRATESIO_
 # look at ${WRKDIR}/cargo-home/registry/src/github.com-${REGISTRY_INDEX}
 # for the list
 CRATES +=  advapi32-sys-0.2.0  # MIT
-CRATES +=  aho-corasick-0.5.2  # Unlicense/MIT
+CRATES +=  aho-corasick-0.5.3  # Unlicense/MIT
 CRATES +=  bitflags-0.1.1  # MIT/Apache-2.0
 CRATES +=  bitflags-0.7.0  # MIT/Apache-2.0
+CRATES +=  bufstream-0.1.2 # MIT/Apache-2.0 (test)
 CRATES +=  cfg-if-0.1.0# MIT/Apache-2.0
 CRATES +=  cmake-0.1.17# MIT/Apache-2.0
 CRATES +=  crossbeam-0.2.9 # MIT/Apache-2.0
-CRATES +=  curl-0.3.2  # MIT
-CRATES +=  curl-sys-0.2.1  # MIT
+CRATES +=  curl-0.3.9  # MIT
+CRATES +=  curl-sys-0.2.4  # MIT
 CRATES +=  docopt-0.6.82   # Unlicense/MIT
 CRATES +=  env_logger-0.3.4# MIT/Apache-2.0
 CRATES +=  filetime-0.1.10 # MIT/Apache-2.0
 CRATES +=  flate2-0.2.14   # MIT/Apache-2.0
 CRATES +=  fs2-0.2.5   # MIT/Apache-2.0
-CRATES +=  gcc-0.3.32  # MIT/Apache-2.0
+CRATES +=  gcc-0.3.35  # MIT/Apache-2.0
 CRATES +=  git2-0.4.4  # MIT/Apache-2.0
 CRATES +=  git2-curl-0.5.0 # MIT/Apache-2.0
 CRATES +=  glob-0.2.11 # MIT/Apache-2.0
-CRATES +=  hamcrest-0.1.0  # no license indication (test 
only)
+CRATES +=  hamcrest-0.1.1  # MIT/Apache-2.0 (test)
 CRATES +=  idna-0.1.0  # MIT/Apache-2.0
 CRATES +=  kernel32-sys-0.2.2  # MIT
 CRATES +=  lazy_static-0.2.1   # MIT
-CRATES +=  libc-0.2.15 # MIT/Apache-2.0
+CRATES +=  libc-0.2.17 # MIT/Apache-2.0
 CRATES +=  libgit2-sys-0.4.5   # MIT/Apache-2.0
-CRATES +=  libssh2-sys-0.1.38  # MIT/Apache-2.0
-CRATES +=  libz-sys-1.0.5  # MIT/Apache-2.0
+CRATES +=  libssh2-sys-0.1.39  # MIT/Apache-2.0
+CRATES +=  libz-sys-1.0.6  # MIT/Apache-2.0
 CRATES +=  log-0.3.6   # MIT/Apache-2.0
 CRATES +=  matches-0.1.2   # MIT
 CRATES +=  memchr-0.1.11   # Unlicense/MIT
 CRATES +=  miniz-sys-0.1.7 # MIT/Apache-2.0
 CRATES +=  miow

CVS: cvs.openbsd.org: ports

2016-11-12 Thread Alexandr Shadchin
CVSROOT:/cvs
Module name:ports
Changes by: shadc...@cvs.openbsd.org2016/11/12 11:12:31

Modified files:
devel/py-test  : Makefile distinfo 

Log message:
Update to py-test 3.0.4



Re: New: biology/hmmer

2016-11-12 Thread Jeremie Courreges-Anglas
Senthil Kumar M  writes:

> Hello ports,
>
> HMMER is used for searching sequence databases for sequence homologs,
> and for making sequence alignments. It implements methods using
> probabilistic models called profile hidden Markov models (profile
> HMMs).  (http://hmmer.org)
>
> The latest version 3.1b2 compiles and builds without any additional
> patches/errors on OpenBSD, unlike previous versions (see: `h104'
> on:
> https://raw.githubusercontent.com/EddyRivasLab/hmmer/master/documentation/bugs/BUGTRAX
> .
>
> HMMER is an indispensable tool for bioinformatics research and it
> would be neat to have it available on OpenBSD.
>
> I have tested this on amd64, additional tests, comments are welcome.

Here's a updated tarball with the following changes:
- more spacing in Makefile
- move PKGNAME to hmmer-3.1beta2, per packages-specs(7)
- I added your name to the mail address in MAINTAINER
- "License GPLv3 only": "GPLv3" is enough, else it would be "GPLv3+"
- make V=1 to show build commands
- disable sse(2) except on amd64
- kill last paragraph in DESCR, trim the third one and merge it with the
  first one.  Those bits didn't seem particularly relevant for a package
  description

Looks good to me as is.  Are the executables in this package useful
alone, or do you use it only for the library?



hmmer.tgz
Description: Binary data
-- 
jca | PGP : 0x1524E7EE / 5135 92C1 AD36 5293 2BDF  DDCC 0DFA 74AE 1524 E7EE


Re: [NEW] www/tbb improved, updated

2016-11-12 Thread attila
[Sorry for duplicate email to anyone who got one, my bad -A]

Landry Breuil  writes:

> On Wed, Nov 02, 2016 at 09:55:17AM -0600, attila wrote:
n>> 
>> Landry Breuil  writes:
>> 
>> > On Tue, Oct 18, 2016 at 11:07:22AM -0500, attila wrote:
>> >> 
>> >> attila  writes:
>> >> 
>> >> > attila  writes:
>> >> >
>> >> >> Hi ports@,
>> >> >>
>> >> > Feedback, comments, most welcome.
>> >> >
>> >> > Pax, -A
>> >> 
>> >> Ping.  Ports attached for convenience.
>> >
>> > Fwiw, i've built the git tip of https://github.com/torbsd/openbsd-ports
>> > on current, and they build fine.
>> 
>> I just pushed a couple of times to address your concerns; updated
>> tarball attached for convenience.
>
> So, more nits portswise only:

Thanks a lot for this feedback.  Attached is a tarball that attempts
to address both your and danj@'s concerns.

> - meta/tbb/pkg/DESCR could use some more wording, as
>   www/tbb/tor-browser/pkg/DESCR.

All of the COMMENTs and pkg/DESCR files have been updated.

> - i dont see a README anywhere installed in the pkgs (could go to
>   meta/tbb/pkg/README, with the added line to the corresponding PLIST)
> explaining the end-user how that whole stuff works, without having to
> refer to the website...

There is now a meta/tor-browser/pkg/README

> - www/tbb/Makefile -> that .if !defined(ADDONS_ONLY) block should go away

Done.

> - no need to cargo-cult BROKEN-sparc64 nor the MODGCC4 stuff for archs
>   where it wont build (yeah i know, i need to clean firefox Makefile..)

Removed.

> - the dependency on gettext looks fishy. BUILD_DEPENDS + LIB_DEPENDS +
>   RUN_DEPENDS ? i dont think so, that also looks like cargoculting.

Fixed.

> - CONFIGURE_STYLE=autoheader ?

I have "autoconf no-autoheader", which I think is correct in this case.
However there was an issue with make configure that I'm not sure I
solved well.

The issue is that the "test -f $$d/configure" in gnu.port.mk fails
because Tor Browser does not have a configure at toplevel, only a
configure.in.  I presume there's a reason why the test is not:
  -f $$d/configure.in -o -f $$d/configure.ac
but I don't understand what it is... ?

My hack was to prepend . to MOZILLA_AUTOCONF_DIRS, since you already
have a pre-configure hook in mozilla.port.mk (which is where I
would've put the "extra" call to autoconf anyway).  This has the
desired effect.  If there's a better, more generic way to deal with
autoconf'd projects that don't ship a top-level configure I would like
to be enlightened.

> - since all extensions are installed *only* for tbb, it should be
>   stressed in their COMMENT/DESCR, so that ppl dont think that
> installing 'https-everywhere' package will magically enabled httpse for
> their firefox..

My munging of PKGNAMEs attempts to address this as well as explicit
text in */pkg/DESCR and COMMENTs.  I put a tb- prefix in the PKGNAMEs
for www/tor-browser/{browser,noscript,https-everywhere}, so the full
list of PKGNAMEs is:
   tor-browser# meta package
   tb-browser # firefox esr fork
   torbutton
   tor-launcher
   tb-noscript
   tb-https-everywhere

> And there are probably other nits... :)

I have a question that might turn into a nit: portcheck complains thus
in www/tor-browser/browser:
  stdc++ in WANTLIB when gcc4 is in MODULES; run port-lib-depends-check and if 
stdc++ is still there, check actual build thoroughly, it's broken

port-lib-depends-check says:
  ...
  tb-browser-6.0.5(www/tor-browser/browser):
  Extra:  stdc++.57

I built www/firefox-esr to see what port-lib-depends-check says there
and it's the same.  I take it this is due to the way that Mozilla does
dynamic loading and there's nothing to be done about it?  This has
always been the case for TB but I forgot to ask until now.

> Landry

Again, thanks a lot for your time.

Pax, -A
--
http://haqistan.net/~attila | att...@stalphonsos.com | 0x62A729CF


tbb605-is.tgz
Description: updated tor browser ports


CVS: cvs.openbsd.org: ports

2016-11-12 Thread Daniel Jakots
CVSROOT:/cvs
Module name:ports
Changes by: d...@cvs.openbsd.org2016/11/12 09:42:24

Modified files:
lang/rust  : Makefile distinfo 
lang/rust/patches: patch-configure patch-src_librustdoc_test_rs 
   patch-src_libstd_sys_unix_ext_net_rs 
   patch-src_tools_compiletest_src_runtest_rs 
lang/rust/pkg  : PLIST-doc PLIST-main 

Log message:
Update to rust-1.13.0, from semarie who takes maintainership again

ok aja@



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Jeremie Courreges-Anglas
CVSROOT:/cvs
Module name:ports
Changes by: j...@cvs.openbsd.org2016/11/12 09:29:16

Modified files:
net/knot   : Makefile 

Log message:
Tell portroach to skip 1.99.1, for it is not an LTS version.



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Antoine Jacoutot
CVSROOT:/cvs
Module name:ports
Changes by: ajacou...@cvs.openbsd.org   2016/11/12 09:27:58

Modified files:
x11/gnome/builder: Makefile 
x11/gnome/builder/patches: 
   patch-plugins_terminal_gb-terminal-view_c 
Added files:
x11/gnome/builder/patches: 
   
patch-libide_subprocess_ide-subprocess-launcher_c 

Log message:
Sync with what's been committed upstream.



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Antoine Jacoutot
CVSROOT:/cvs
Module name:ports
Changes by: ajacou...@cvs.openbsd.org   2016/11/12 09:26:46

Modified files:
cad/gtkwave: Makefile distinfo 

Log message:
Update to gtkwave-3.3.78.



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Stuart Henderson
CVSROOT:/cvs
Module name:ports
Changes by: st...@cvs.openbsd.org   2016/11/12 09:15:31

Modified files:
net/wireshark  : Makefile 
net/wireshark/pkg: PLIST-text 

Log message:
Add hidden dep (security/libssh) to Wireshark, noticed by naddy.
This enables building sshdump and ciscodump providing an interface
to run remote captures.



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Stuart Henderson
CVSROOT:/cvs
Module name:ports
Changes by: st...@cvs.openbsd.org   2016/11/12 08:55:22

Modified files:
lang/lucee : Makefile distinfo 

Log message:
update to Lucee 4.5.3.020



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Stuart Henderson
CVSROOT:/cvs
Module name:ports
Changes by: st...@cvs.openbsd.org   2016/11/12 08:37:32

Modified files:
mail/dovecot   : Makefile 
mail/dovecot/pkg: PLIST-ldap PLIST-server 

Log message:
move include/dovecot/ldap-client.h to PLIST-ldap, reported by brad and dhill,
based on a diff from dhill



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Alexandr Shadchin
CVSROOT:/cvs
Module name:ports
Changes by: shadc...@cvs.openbsd.org2016/11/12 07:31:53

Modified files:
net: Makefile 

Log message:
+py-boto,python3



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Alexandr Shadchin
CVSROOT:/cvs
Module name:ports
Changes by: shadc...@cvs.openbsd.org2016/11/12 07:30:41

Modified files:
net/py-boto: Makefile 
net/py-boto/pkg: PLIST 
Added files:
net/py-boto/pkg: PFRAG.no-python3 

Log message:
Add py3 flavor for py-boto (only package, without utilities)

ok ajacoutot@



Re: add py3 flavor for py-boto

2016-11-12 Thread Antoine Jacoutot
On Sat, Nov 12, 2016 at 06:35:56PM +0500, Alexandr Shadchin wrote:
> On Fri, Nov 11, 2016 at 01:01:21PM +0100, Antoine Jacoutot wrote:
> > On Fri, Nov 11, 2016 at 03:05:14PM +0500, Alexandr Shadchin wrote:
> > > On Fri, Nov 11, 2016 at 10:46:16AM +0100, Antoine Jacoutot wrote:
> > > > On Fri, Nov 11, 2016 at 02:43:51PM +0500, Alexandr Shadchin wrote:
> > > > > Add py3 flavor for py-boto. OK ?
> > > > 
> > > > Hmm, not a super fan of it.
> > > > Why is it needed for?
> > > > 
> > > 
> > > I work on py-pandas. For docs and test need py-boto.
> > > 
> > > It not critical. I just decided to propose.
> > > 
> > > For docs need more depends, which not in tree.
> > > I'm inclined to disable the documentation.
> > > 
> > > For test - if not exists py-boto then test will skipped.
> > 
> > I usually don't mind adding python3 FLAVOR to python ports, but I don't 
> > really like it when they ship utilities and not just libs/modules.
> > That's the reason I did not create a sysutils/awscli python3 FLAVOR either.
> > Also I'm aware of external scripts using things like s3put... which will 
> > break if one only installs the python3 FLAVOR.
> > 
> > What I propose you do is to only package the utilities for !python3.
> > rm them when building -python3 and add a PFRAG for !python3.
> > 
> > Hope that makes sense ;-)
> > 
> > 
> 
> Hmm, but I like this idea :-)
> Update diff.

Cool, OK aja :-)

> -- 
> Alexandr Shadchin
> 
> Index: Makefile
> ===
> RCS file: /cvs/ports/net/py-boto/Makefile,v
> retrieving revision 1.21
> diff -u -p -r1.21 Makefile
> --- Makefile  18 Oct 2016 07:26:26 -  1.21
> +++ Makefile  12 Nov 2016 13:28:30 -
> @@ -4,7 +4,8 @@ COMMENT=  python interface to amazon web
>  
>  MODPY_EGG_VERSION=   2.43.0
>  DISTNAME=boto-${MODPY_EGG_VERSION}
> -PKGNAME= py-${DISTNAME}
> +PKGNAME= py-${DISTNAME}
> +REVISION=0
>  
>  CATEGORIES=  net
>  
> @@ -20,9 +21,12 @@ MODULES=   lang/python
>  MODPY_PI=Yes
>  MODPY_SETUPTOOLS=Yes
>  
> -RUN_DEPENDS= security/py-paramiko \
> - textproc/py-yaml \
> - www/py-requests
> +RUN_DEPENDS= security/py-paramiko${MODPY_FLAVOR} \
> + textproc/py-yaml${MODPY_FLAVOR} \
> + www/py-requests${MODPY_FLAVOR}
> +
> +FLAVORS= python3
> +FLAVOR?=
>  
>  # requires an AWS account
>  TEST_IS_INTERACTIVE= Yes
> Index: pkg/PFRAG.no-python3
> ===
> RCS file: pkg/PFRAG.no-python3
> diff -N pkg/PFRAG.no-python3
> --- /dev/null 1 Jan 1970 00:00:00 -
> +++ pkg/PFRAG.no-python3  12 Nov 2016 13:28:30 -
> @@ -0,0 +1,22 @@
> +@comment $OpenBSD$
> +bin/asadmin
> +bin/bundle_image
> +bin/cfadmin
> +bin/cq
> +bin/cwutil
> +bin/dynamodb_dump
> +bin/dynamodb_load
> +bin/elbadmin
> +bin/fetch_file
> +bin/glacier
> +bin/instance_events
> +bin/kill_instance
> +bin/launch_instance
> +bin/list_instances
> +bin/lss3
> +bin/mturk
> +bin/pyami_sendmail
> +bin/route53
> +bin/s3put
> +bin/sdbadmin
> +bin/taskadmin
> Index: pkg/PLIST
> ===
> RCS file: /cvs/ports/net/py-boto/pkg/PLIST,v
> retrieving revision 1.8
> diff -u -p -r1.8 PLIST
> --- pkg/PLIST 20 Mar 2016 11:18:11 -  1.8
> +++ pkg/PLIST 12 Nov 2016 13:28:30 -
> @@ -1,25 +1,5 @@
>  @comment $OpenBSD: PLIST,v 1.8 2016/03/20 11:18:11 ajacoutot Exp $
> -bin/asadmin
> -bin/bundle_image
> -bin/cfadmin
> -bin/cq
> -bin/cwutil
> -bin/dynamodb_dump
> -bin/dynamodb_load
> -bin/elbadmin
> -bin/fetch_file
> -bin/glacier
> -bin/instance_events
> -bin/kill_instance
> -bin/launch_instance
> -bin/list_instances
> -bin/lss3
> -bin/mturk
> -bin/pyami_sendmail
> -bin/route53
> -bin/s3put
> -bin/sdbadmin
> -bin/taskadmin
> +!%%python3%%
>  lib/python${MODPY_VERSION}/site-packages/boto/
>  
> lib/python${MODPY_VERSION}/site-packages/boto-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/
>  
> lib/python${MODPY_VERSION}/site-packages/boto-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/PKG-INFO
> @@ -27,816 +7,882 @@ lib/python${MODPY_VERSION}/site-packages
>  
> lib/python${MODPY_VERSION}/site-packages/boto-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/dependency_links.txt
>  
> lib/python${MODPY_VERSION}/site-packages/boto-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/top_level.txt
>  lib/python${MODPY_VERSION}/site-packages/boto/__init__.py
> -lib/python${MODPY_VERSION}/site-packages/boto/__init__.pyc
> +${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/boto/${MODPY_PYCACHE}/
> +lib/python${MODPY_VERSION}/site-packages/boto/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
> +lib/python${MODPY_VERSION}/site-packages/boto/${MODPY_PYCACHE}auth.${MODPY_PYC_MAGIC_TAG}pyc
> 

Re: add py3 flavor for py-boto

2016-11-12 Thread Alexandr Shadchin
On Fri, Nov 11, 2016 at 01:01:21PM +0100, Antoine Jacoutot wrote:
> On Fri, Nov 11, 2016 at 03:05:14PM +0500, Alexandr Shadchin wrote:
> > On Fri, Nov 11, 2016 at 10:46:16AM +0100, Antoine Jacoutot wrote:
> > > On Fri, Nov 11, 2016 at 02:43:51PM +0500, Alexandr Shadchin wrote:
> > > > Add py3 flavor for py-boto. OK ?
> > > 
> > > Hmm, not a super fan of it.
> > > Why is it needed for?
> > > 
> > 
> > I work on py-pandas. For docs and test need py-boto.
> > 
> > It not critical. I just decided to propose.
> > 
> > For docs need more depends, which not in tree.
> > I'm inclined to disable the documentation.
> > 
> > For test - if not exists py-boto then test will skipped.
> 
> I usually don't mind adding python3 FLAVOR to python ports, but I don't 
> really like it when they ship utilities and not just libs/modules.
> That's the reason I did not create a sysutils/awscli python3 FLAVOR either.
> Also I'm aware of external scripts using things like s3put... which will 
> break if one only installs the python3 FLAVOR.
> 
> What I propose you do is to only package the utilities for !python3.
> rm them when building -python3 and add a PFRAG for !python3.
> 
> Hope that makes sense ;-)
> 
> 

Hmm, but I like this idea :-)
Update diff.

-- 
Alexandr Shadchin

Index: Makefile
===
RCS file: /cvs/ports/net/py-boto/Makefile,v
retrieving revision 1.21
diff -u -p -r1.21 Makefile
--- Makefile18 Oct 2016 07:26:26 -  1.21
+++ Makefile12 Nov 2016 13:28:30 -
@@ -4,7 +4,8 @@ COMMENT=python interface to amazon web
 
 MODPY_EGG_VERSION= 2.43.0
 DISTNAME=  boto-${MODPY_EGG_VERSION}
-PKGNAME=   py-${DISTNAME}
+PKGNAME=   py-${DISTNAME}
+REVISION=  0
 
 CATEGORIES=net
 
@@ -20,9 +21,12 @@ MODULES= lang/python
 MODPY_PI=  Yes
 MODPY_SETUPTOOLS=  Yes
 
-RUN_DEPENDS=   security/py-paramiko \
-   textproc/py-yaml \
-   www/py-requests
+RUN_DEPENDS=   security/py-paramiko${MODPY_FLAVOR} \
+   textproc/py-yaml${MODPY_FLAVOR} \
+   www/py-requests${MODPY_FLAVOR}
+
+FLAVORS=   python3
+FLAVOR?=
 
 # requires an AWS account
 TEST_IS_INTERACTIVE=   Yes
Index: pkg/PFRAG.no-python3
===
RCS file: pkg/PFRAG.no-python3
diff -N pkg/PFRAG.no-python3
--- /dev/null   1 Jan 1970 00:00:00 -
+++ pkg/PFRAG.no-python312 Nov 2016 13:28:30 -
@@ -0,0 +1,22 @@
+@comment $OpenBSD$
+bin/asadmin
+bin/bundle_image
+bin/cfadmin
+bin/cq
+bin/cwutil
+bin/dynamodb_dump
+bin/dynamodb_load
+bin/elbadmin
+bin/fetch_file
+bin/glacier
+bin/instance_events
+bin/kill_instance
+bin/launch_instance
+bin/list_instances
+bin/lss3
+bin/mturk
+bin/pyami_sendmail
+bin/route53
+bin/s3put
+bin/sdbadmin
+bin/taskadmin
Index: pkg/PLIST
===
RCS file: /cvs/ports/net/py-boto/pkg/PLIST,v
retrieving revision 1.8
diff -u -p -r1.8 PLIST
--- pkg/PLIST   20 Mar 2016 11:18:11 -  1.8
+++ pkg/PLIST   12 Nov 2016 13:28:30 -
@@ -1,25 +1,5 @@
 @comment $OpenBSD: PLIST,v 1.8 2016/03/20 11:18:11 ajacoutot Exp $
-bin/asadmin
-bin/bundle_image
-bin/cfadmin
-bin/cq
-bin/cwutil
-bin/dynamodb_dump
-bin/dynamodb_load
-bin/elbadmin
-bin/fetch_file
-bin/glacier
-bin/instance_events
-bin/kill_instance
-bin/launch_instance
-bin/list_instances
-bin/lss3
-bin/mturk
-bin/pyami_sendmail
-bin/route53
-bin/s3put
-bin/sdbadmin
-bin/taskadmin
+!%%python3%%
 lib/python${MODPY_VERSION}/site-packages/boto/
 
lib/python${MODPY_VERSION}/site-packages/boto-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/
 
lib/python${MODPY_VERSION}/site-packages/boto-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/PKG-INFO
@@ -27,816 +7,882 @@ lib/python${MODPY_VERSION}/site-packages
 
lib/python${MODPY_VERSION}/site-packages/boto-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/dependency_links.txt
 
lib/python${MODPY_VERSION}/site-packages/boto-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/top_level.txt
 lib/python${MODPY_VERSION}/site-packages/boto/__init__.py
-lib/python${MODPY_VERSION}/site-packages/boto/__init__.pyc
+${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/boto/${MODPY_PYCACHE}/
+lib/python${MODPY_VERSION}/site-packages/boto/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
+lib/python${MODPY_VERSION}/site-packages/boto/${MODPY_PYCACHE}auth.${MODPY_PYC_MAGIC_TAG}pyc
+lib/python${MODPY_VERSION}/site-packages/boto/${MODPY_PYCACHE}auth_handler.${MODPY_PYC_MAGIC_TAG}pyc
+lib/python${MODPY_VERSION}/site-packages/boto/${MODPY_PYCACHE}compat.${MODPY_PYC_MAGIC_TAG}pyc
+lib/python${MODPY_VERSION}/site-packages/boto/${MODPY_PYCACHE}connection.${MODPY_PYC_MAGIC_TAG}pyc
+lib/python${MODPY_VERSION}/site-packages/boto/${MODPY_PYCACHE}exception.${MODPY_PYC_MAGIC_TAG}pyc

CVS: cvs.openbsd.org: ports

2016-11-12 Thread Jeremie Courreges-Anglas
CVSROOT:/cvs
Module name:ports
Changes by: j...@cvs.openbsd.org2016/11/12 03:33:04

Modified files:
devel/boehm-gc : Makefile distinfo 
devel/boehm-gc/patches: patch-include_private_gcconfig_h 
devel/boehm-gc/pkg: PLIST-main 

Log message:
Update to gc-7.6.0 and libatomic_ops-7.4.4

Maintenance only update for libatomic_ops.  Bulk build and ok ajacoutot@



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Antoine Jacoutot
CVSROOT:/cvs
Module name:ports
Changes by: ajacou...@cvs.openbsd.org   2016/11/12 03:32:28

Modified files:
meta/gnome : Makefile 
meta/gnome/pkg : README-main 

Log message:
Extend GDM configuration and add a note that changing the GDM kbd layout is
not possible due to the lack of systemd-localed support.



Re: [update] lang/rust 1.13.0

2016-11-12 Thread Daniel Jakots
On Sat, 12 Nov 2016 10:00:45 +0100, Sebastien Marie 
wrote:

> Here an update for lang/rust to 1.13.0

It's ok danj@ (I'm not really quick, I got premium access to the
diff ;)).

Cheers,
Daniel



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Landry Breuil
CVSROOT:/cvs
Module name:ports
Changes by: lan...@cvs.openbsd.org  2016/11/12 01:53:11

Modified files:
devel/cargo: Makefile 

Log message:
Mark temporarly BROKEN, crates.io requires Accept: HTTP header, cf 
https://github.com/rust-lang/crates.io/issues/466



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Antoine Jacoutot
CVSROOT:/cvs
Module name:ports
Changes by: ajacou...@cvs.openbsd.org   2016/11/12 01:41:38

Modified files:
sysutils/awscli: Makefile distinfo 

Log message:
Update to awscli-1.11.14.



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Antoine Jacoutot
CVSROOT:/cvs
Module name:ports
Changes by: ajacou...@cvs.openbsd.org   2016/11/12 01:41:22

Modified files:
net/py-botocore: Makefile distinfo 

Log message:
Update to py-botocore-1.4.71.



CVS: cvs.openbsd.org: ports

2016-11-12 Thread Antoine Jacoutot
CVSROOT:/cvs
Module name:ports
Changes by: ajacou...@cvs.openbsd.org   2016/11/12 01:32:48

Modified files:
graphics/graphite2: Makefile distinfo 

Log message:
Update to graphite2-1.3.9.