Hi all,
Just wanted to mention that I've updated some of the info on the wiki here:
http://www.pymolwiki.org/index.php/Stereo_3D_Display_Options#LCD_Displays_.28120_Hz.29
to note that quad buffered stereo (QBS) on the 120Hz Samsung 2233RZ
LCD monitor works on Linux. It's nowhere as cheap as the
David,
I think groups are treated like objects (see "help group"). So, one can type
print cmd.get_names("objects")
and all the objects (proteins, groups, etc) will be returned.
For example:
group a
group b
group c
print cmd.get_names("objects")
The problem is that other objects will
How would someone get the list of groups in a pymol session? get_object_list
doesn't have them and the only commands I can find in cmd that have the word
"group" in them seems to be group and ungroup (if my quick regex search worked
right).
Thanks,
David
Hi Raluca,
So I am guessing this something like the surface being in fragments,
with small vertices floating within the larger object?
Unfortunately there is no easy way to do this from within PyMOL,
unless you can "separate" out the residues/atoms that are contributing
the disjointed meshes into
Thank you Shiven,
I know how to remove the double vertices in Blender but I
would like to remove them directly from PyMOL. By disjoint
meshes I mean non-connected meshes, inside my mesh I have some
smaller meshes that are non connected to the big mesh. I would
like to know how to remove these m
Raluca,
Something that helps is: tabbing into edit mode, selecting all
vertices (ctrl-a) and removing doubles (Mesh >Vertices >Remove
Doubles).
Turning on smooth display also helps.
What exactly are you having problems with? In what way are things
"disjointed" ?
Best,
Shiven
On Mon, Dec 21,
Hi,
I imported into Blender (a 3D modelling and animation
software) a surface created in PyMOL and I realized that there
are some disjoint surfaces inside. Is it possible to remove
these surfaces in PyMOL?
Thank you,
Raluca
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