Hi Martin,
I have a script that does almost exactly what you want (I guess). See
attachment.
Cheers,
Thomas
On Wed, Mar 23, 2011 at 11:19 PM, Martin Hediger ma@bluewin.ch wrote:
Dear List
I'm trying to automate the following sequence of steps in a PyMOL python
script:
1. Start the
Hi Jason,
many thanks for your reply and efforts. I hope you have a good time at the
meetings.
Keep up the good work !!
cheers,
Abhi
On Wed, Mar 23, 2011 at 8:06 PM, Jason Vertrees
jason.vertr...@schrodinger.com wrote:
Hi Stephen,
I would like to know if, and when, 1.4 will be available
there was a bug in the script, sorry. Corrected script attached.
Cheers,
Thomas
On Thu, Mar 24, 2011 at 8:40 AM, Thomas Holder
spel...@users.sourceforge.net wrote:
Hi Martin,
I have a script that does almost exactly what you want (I guess). See
attachment.
Cheers,
Thomas
--
Thomas
Hi Ian,
As this may be of broader interest, I forward it to the pymol user list too.
You can clip the scene using an intersection. Let's say that you have
the object you want to clip stored as a povray include file
object.inc. Then you can get the clipped object as:
//###
pymol_object = union {
Hi Jason et al,
We just added PyMOL 1.4 to our software environment, and it looks like
Numpy doesn't want to run on 10.5.8 machines:
PyMOLimport numpy
Traceback (most recent call last):
File /programs/m/pymol/1.4/MacPyMOL.app/pymol/modules/pymol/parser.py, line
260, in parse
Dear Colleagues,
This is a reminder that the deadline for applications for the 4th annual
CCP4 summer school From data collection to structure refinement and
beyond is April 8. The school will take place June 7-15, 2011 at the
Advanced Photon Source (APS) near Chicago.
There is no
Hi Ben,
Thanks for finding this. A colleague looked into this and says it's
fixable. So, we'll have a fix out soon. This is a 10.5-specific
numpy issue. Our update release is planned to follow soon to clear up
a few small issues.
Cheers,
-- Jason
On Thu, Mar 24, 2011 at 3:42 PM, Ben
