Note that currently R internals do not actually use multiple threads
in OpenMP, and there is no documented way to make them do so.
The main issue is that there is insufficient knowlege of where they
are worthwhile (which is both OS and platform-dependent: we don't even
have reliable
On Tue, 30 Aug 2011, Duncan Murdoch wrote:
On 30/08/2011 1:50 PM, Jeffrey Ryan wrote:
R-devel,
I am interested in creating a package that requires non-GPL'd
(commercial) C code to work. In essence it is a single .c file
with no use of R headers (all .C callable functions). For
example's
On Thu, 11 Aug 2011, Michael Lawrence wrote:
Hi guys,
This probably isn't news, but when a package is given an autogenerated
namespace, its .First.lib, if any, is no longer called.
Please do read the NEWS file: .First.lib *is* called as either .onLoad
or .onAttach.
This causes problems,
It is Rmath.dll: case often matters in searching.
You should look in the obvious manual in your (old) installation, the
'R Installation and Administration' manual. The current version is at
http://cran.r-project.org/doc/manuals/R-admin.html#The-standalone-Rmath-library
On Mon, 8 Aug 2011,
First off, this was an R-devel question (or maybe an r-sig-fedora
one).
It is not at all easy to give a complete answer: the list is very long
and changes rapidly as Fedora updates. If you can use yum to install
a minimal list and let it get the dependencies the list would be
manageable.
On Wed, 3 Aug 2011, robin hankin wrote:
Hi.
I am having difficulty following section 1.6.6 of the R-extensions manual.
Also in following the posting guide: which version of R is this (it
matters here!)?
It seems you are failing to import the functions you are attempting to
take over as
Please don't spam multiple lists!
And follow the posting guide: you have not given the reproducible
example asked for, there is no signature block
Of course you could waste people's time by submitting a package that
does not past R CMD check, but you are asked to follow a set of checks
On Sat, 30 Jul 2011, baptiste auguie wrote:
Dear list,
I'd like to get rid off a couple of warnings that have appeared in
checking my package on CRAN (I did not find them on my local machine
before submission). What puzzles me is that different platforms return
different warnings, only one of
Point 1 is as documented: you have exceeded the maximum integer and it
does say that it gives NA. So the only 'odd' is reporting that you
did not read the documentation.
Point 2 is R not using the correct units for --max-vsize (it used the
number of Vcells, as was once documented), and I
The message is from maptools (as it says), not sp.
No, there is nothing you can do when dependent packages put out
messages. You could ask the maintainer not to put the message out
when rgeos is available
On Fri, 22 Jul 2011, Mauricio Zambrano-Bigiarini wrote:
Dear List,
I'm
It does not seem to happen to anyone else, including me on FreeBSD.
Is this a completely clean install? src/library/datasets/Makefile
definitely installs a NAMESPACE file as part of the mkR1 target, so I
would check that you have a src/library/datasets/NAMESPACE file in
your sources.
(There
the tarballs, but CRAN is not manned at
present.)
But as far as I can the 'make dist' procedure does work now and did
at some point in the last week.
On Fri, 22 Jul 2011, Prof Brian Ripley wrote:
It does not seem to happen to anyone else, including me on FreeBSD. Is this a
completely clean
On Wed, 20 Jul 2011, David A. Johnston wrote:
I understand that the coercion to a list is somewhat trivial. The coercion
is a little less obvious when apply()'s output is a matrix. For example,
x = matrix(1:12, 3, 4)
apply(x, 1, range)
[,1] [,2] [,3]
[1,]123
[2,] 10 11
On Wed, 20 Jul 2011, Prof Brian Ripley wrote:
1) The current R-patched should compile src/extra/xdr on 32-bit Linux
systems.
2) Longer-term or on a 64-bit platform the solution is to make use of
libtirpc: you would need both this installed (common now) and its headers
(unlikely
to be in the C include path
(not easy to do portably, but using C_INCLUDE_PATH will work on
Linux), the tirpc versions should be found.
On Tue, 19 Jul 2011, Prof Brian Ripley wrote:
On Mon, 18 Jul 2011, Allin Cottrell wrote:
On Mon, 18 Jul 2011, Prof Brian Ripley wrote:
1) R-help is the wrong list: see
On Wed, 20 Jul 2011, Simon Urbanek wrote:
On Jul 20, 2011, at 3:01 PM, Duncan Murdoch wrote:
On 20/07/2011 10:40 AM, WADA Kazuya wrote:
Hi
I don't know how to complie R-2.13.1 with MKL in windows 7 64bit.
I can compile normal R in windows using Rtools under R-admin.html description.
On Mon, 18 Jul 2011, Alireza Mahani wrote:
Simon,
Thank you for elaborating on the limitations of R in handling float types. I
think I'm pretty much there with you.
As for the insufficiency of single-precision math (and hence limitations of
GPU), my personal take so far has been that
Uwe is now a member of R-core.
--
Brian D. Ripley, rip...@stats.ox.ac.uk
Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
University of Oxford, Tel: +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1
1) R-help is the wrong list: see the posting guide. I've moved this
to R-devel.
2) A glibc system should not be compiling in that directory. glibc
2.14 is rather recent and NEWS does say
* The RPC implementation in libc is obsoleted. Old programs keep working
but new programs cannot be
On Mon, 18 Jul 2011, Allin Cottrell wrote:
On Mon, 18 Jul 2011, Prof Brian Ripley wrote:
1) R-help is the wrong list: see the posting guide. I've moved this to
R-devel.
2) A glibc system should not be compiling in that directory. glibc 2.14 is
rather recent and NEWS does say
* The RPC
On Sun, 17 Jul 2011, Duncan Murdoch wrote:
On 11-07-16 10:13 PM, Gabor Grothendieck wrote:
Packages without explicit ‘NAMESPACE’ files will have a default one
created at build or INSTALL time,
so all packages will have namespaces. A consequence of this is that
‘.First.lib’ functions need to
if it worked,
which it currently does not). We just ask that we are told so on
submission.
-Melissa
On Thu, Jul 14, 2011 at 1:00 PM, Ben Bolker bbol...@gmail.com wrote:
Prof Brian Ripley ripley at stats.ox.ac.uk writes:
It depends what you mean by 'vignette': the R docs have been unclear
On Mon, 11 Jul 2011, andr...@eckner.com wrote:
Hi,
in save.image, it would be nice if there was a compression_level
argument that is passed along to save.
Or is there a reason for disabling the compression_level option for
saving workspaces, but enabling it for manually saving individual
Collation is locale-specific. To stop problems such as that you
encontered, where it matters 'R CMD check' uses LC_COLLATE=C (and
documents it). Otherwise package checks would be system-dependent,
and maybe even user-dependent.
It really isn't a good idea to misuse examples in help files
There was an R-core meeting the week before last, and various planned
changes will appear in R-devel over the next few weeks.
These are changes planned for R 2.14.0 scheduled for Oct 31. As we
are sick of people referring to R-devel as '2.14' or '2.14.0', that
version number will not be used
On Mon, 4 Jul 2011, Martin Morgan wrote:
On 07/04/2011 05:08 AM, Prof Brian Ripley wrote:
There was an R-core meeting the week before last, and various planned
changes will appear in R-devel over the next few weeks.
These are changes planned for R 2.14.0 scheduled for Oct 31. As we are
sick
On Wed, 22 Jun 2011, Stephen Ellison wrote:
Is there a quick way of checking the R manuals built from the .texi
files in ../doc/manual without building the rest of R?
What does 'check' mean?
Going from a vanilla checkout, some included files are missing (eg
version.texi) and created by the
On Sun, 19 Jun 2011, Uwe Ligges wrote:
On 19.06.2011 20:17, soeren.vo...@uzh.ch wrote:
Hello
I have a package with a configure script (--include-something). How does
the package pass the check on CRAN, that is, how should I signalise that
check and install may need options?
Which
On Fri, 17 Jun 2011, peter dalgaard wrote:
On Jun 17, 2011, at 01:53 , Drew Frank wrote:
Hello,
I've noticed that X11 device windows (the ones that pop up when I plot
something on Linux) aren't assigned any WM_NAME property until after they've
been spawned. This causes problems for users
are created at install time.
At load time, the stub loader creates promises to objects in the
database in an environment in the current session.
There is rather more to it, e.g. for lazydata and packages with
sysdata.rda, but that is gist.
On Wed, 15 Jun 2011, Prof Brian Ripley wrote:
On Tue, 14 Jun
On Tue, 14 Jun 2011, Stephen Ellison wrote:
I'm sure i've seen the answer to this, but can't find it:
If there is executable code in an R package .R file that does not
return a function (that is, something like x - rnorm(5), outside
any function body ), what will actually happens at build
On Sun, 12 Jun 2011, Uwe Ligges wrote:
On 12.06.2011 18:57, Sylvain Loiseau wrote:
Hello,
I'm facing problems with compiling a package (containing only R-code and
dataset) under OSX for Windows.
Packages are 'installed': compilation is only involved if they contain
C/Fortran/C++/...
Note that until May 8 graph was a CRAN packge and the current version
was 1.30.0. So of course CRAN binary packages built between April 26
and May 8 were built against the current CRAN version of graph, for
any version of R.
On Fri, 10 Jun 2011, Martin Morgan wrote:
On 06/10/2011 05:46 PM,
On Sat, 11 Jun 2011, Kornelius Rohmeyer wrote:
2011/6/11 Prof Brian Ripley rip...@stats.ox.ac.uk:
Note that until May 8 graph was a CRAN packge and the current version was
1.30.0. So of course CRAN binary packages built between April 26 and May 8
were built against the current CRAN version
On Fri, 10 Jun 2011, Janko Thyson wrote:
Dear list,
I've been trying to get gWidgets/gWidgetsRGtk2 to run every other month for a
while, but somehow I simply can't figure out what's going wrong.
Your subject line indicates your confusion. It does not say RGtk2.dll
cannot be found (at
work for me, Uwe on winbuilder and in our teaching lab (and the advice
in RGtk2 does not).
On Fri, 10 Jun 2011, Janko Thyson wrote:
On 10.06.2011 13:18, Prof Brian Ripley wrote:
On Fri, 10 Jun 2011, Janko Thyson wrote:
Dear list,
I've been trying to get gWidgets
On Tue, 7 Jun 2011, Duncan Murdoch wrote:
On 07/06/2011 9:08 AM, oliver wrote:
Hello,
following an advice here from the list I looked into sources of other
packages (xts) and found the TYPEOF() macro/function, which really is
helpful.
It is documented, of course, but actually better
On Mon, 6 Jun 2011, Uwe Ligges wrote:
On 06.06.2011 15:30, Stefan McKinnon Høj-Edwards wrote:
Hello,
I am trying to run RCMD check on a package. It performs OK, with the
exception of a single warning:
* checking package vignettes in 'inst/doc' ... WARNING
Package vignette(s) without
On Thu, 2 Jun 2011, Dario Strbenac wrote:
Hello,
I thought I'd add this to the mailing list, in case it could be handled
smoother in a future release of R.
Impossible without a reliably reproducible example (see the posting
guide). But it does look as if you have managed to corrupt R's
On Tue, 31 May 2011, Romain Francois wrote:
Hello,
assignInNamespace refuses to assign an object to a name that is not already
used in the namespace.
That's intentional, and as documented:
‘assignInNamespace’ and ‘fixInNamespace’ are invoked for their
side effect of changing the
On Tue, 31 May 2011, Prof Brian Ripley wrote:
On Tue, 31 May 2011, Romain Francois wrote:
Hello,
assignInNamespace refuses to assign an object to a name that is not already
used in the namespace.
That's intentional, and as documented:
‘assignInNamespace’ and ‘fixInNamespace
On Sat, 21 May 2011, Spencer Graves wrote:
p.s. I've used subversion successfully with LaTeX, R and Python. I tried it
with MS Word *.rtf format and found it was next to impossible, because any
conflict produced an indecipherable diff file comparison.
.rtf is not a Word format, although it
I am not the author, but looking at the code shows that raw_read has a
line missing compared to raw_write.
It should work now in R-devel/R-patched.
Thanks for the report.
On Mon, 2 May 2011, William Dunlap wrote:
Am I misunderstanding rawConnections here or are
rawConnections not working
On Wed, 11 May 2011, Stefan McKinnon Høj-Edwards wrote:
Hi,
When I run RCMD check on my package, I receive the following error:
C:\R-packages\AnnotationFuncsRCMD check --no-vignettes AnnotationFuncs
* using log directory 'C:/R-packages/AnnotationFuncs/AnnotationFuncs.Rcheck'
* using R version
On Mon, 9 May 2011, Sharpie wrote:
aftar wrote:
Hi
Can we use BLAS in R X64 for windows?
Regards
Aftar
You are already using BLAS in R as R includes its own BLAS library. On
Windows the 64-bit DLL is located at R_HOME\bin\x64\Rblas.dll.
If you are asking about swapping that out for an
On Sun, 1 May 2011, Duncan Murdoch wrote:
On 11-05-01 4:10 PM, cstrato wrote:
Dear Duncan, dear Uwe,
Since I have installed both WinXP and OpenSUSE 11.3 on my Mac in a
virtual machine, I have now done the following tests on all three
architectures:
1, R CMD build xps:
This creates
On Fri, 29 Apr 2011, Dario Strbenac wrote:
Hello,
In my description file, I have an example data package in Suggests:
that I've deleted from my library to test what the user who doesn't
have it will experience.
However, R CMD check won't even pass my package :
* checking package
On Fri, 29 Apr 2011, Hervé Pagès wrote:
On 11-03-30 01:55 AM, Prof Brian Ripley wrote:
What R CMD build (and check) does is to call tools::buildVignettes.
That has been true for a while, and buildVignettes() returns if no
vignettes are found. The docs are out-of-date.
My view is that you
On Thu, 28 Apr 2011, Duncan Murdoch wrote:
On 27/04/2011 12:55 PM, Brett Smith wrote:
Hello,
I'm sending this to R-devel under the guideline that the ensuing
discussion would probably be unintelligible to people who aren't
programmers. If that's not right, I apologize.
On Thu, 21 Apr 2011, Pfaff, Bernhard Dr. wrote:
Dear list subscriber,
I am quite puzzled by the behaviour of processing Sweave files within an R
session, i.e.
Sweave(foo.Rnw) versus R CMD Sweave foo.Rnw
In the former the environmental variable 'SWEAVE_STYLEPATH_DEFAULT =
TRUE' is obeyed
Well, lots of functions are not generic. We do ask you to give a case
for such changes ... where is it?
On Wed, 20 Apr 2011, Martin Morgan wrote:
as.factor / as.ordered is not written as a generic. This differs from
as.numeric, as.matrix, and other as.*. The following seems to address this
On Sun, 17 Apr 2011, jusce wrote:
Hello All!
I'm a new R user, with no much experience.
I have a R script (downloaded from internet) which has user interaction
using readline() function.
So as I have to run it repeatdly (with some different options) I was
planning to do it on a BATCH mode.
Is
This isn't 'R fails', it is 'StatConnector' fails. That project is
nothing to do with this list, so please don't ask here for free
consultancy on it (and fail to give any of the information asked for
in our posting guide).
On Mon, 18 Apr 2011, Shawna JOB wrote:
Does anyone have any
On Mon, 18 Apr 2011, Duncan Murdoch wrote:
On 11-04-18 5:51 PM, Terry Therneau wrote:
I've narrowed my scope problems with predict.coxph further.
Here is a condensed example:
fcall3- as.formula(time ~ age)
dfun3- function(dcall) {
fit- lm(dcall, data=lung, model=FALSE)
I suspect you omitted some of the help page:
As they are written for speed, they blur over some of the subtleties
of ‘NaN’ and ‘NA’.
So, given that (and that real NA is a specific NaN) I think it is
perfectly reasonable to claim they are consistent with mean.
On Tue, 5 Apr 2011, Gavin
-Original Message-
From: Prof Brian Ripley [mailto:rip...@stats.ox.ac.uk]
Sent: Monday, April 04, 2011 3:41 PM
To: Greg Snow
Cc: R-devel@r-project.org
Subject: Re: [Rd] Use keep.source for function in package with lazy
loading
On Mon, 4 Apr 2011, Greg Snow wrote:
I have a function in one of my
As far as I can see read.maimages is built on top of R's own
file-reading facilties, and they all read compressed (but not zipped)
files as from R 2.10.0.
So simply use
gzip -9 coral55?.spot
and rename the files back to *.spot.
If you need more compression, use xz -9e. (You can also do
On Fri, 8 Apr 2011, peter dalgaard wrote:
(Resending with fewer recipients...)
On Apr 8, 2011, at 07:09 , Hin-Tak Leung wrote:
--- On Fri, 8/4/11, peter dalgaard pda...@gmail.com wrote:
On Apr 7, 2011, at 23:57 , Hin-Tak Leung wrote:
Oh, I am tracking both R and Matrix via git-svn and
On Sun, 3 Apr 2011, Thomas Mang wrote:
Hi,
I have R version 2.8.1 and Rtools 28 installed (as you might guess, set up
years ago). In Rtools the MinGW GCC 4.2 compiler toolset is included.
For my regular C/C++ programs I have also installed, separately, the full
MinGW bundle with the latest
On Mon, 4 Apr 2011, Greg Snow wrote:
I have a function in one of my packages that I would like to print
using the original source rather than the deparse of the function.
The package uses lazy loading and the help page for library (under
keep.source) says that keep.source does not apply to
What R CMD build (and check) does is to call tools::buildVignettes.
That has been true for a while, and buildVignettes() returns if no
vignettes are found. The docs are out-of-date.
My view is that you are misusing inst/doc: it is intended *only* for
files which are going to be installed and
On Mon, 28 Mar 2011, S Ellison wrote:
Please forgive any mis-post, and do feel free to point me to a more
appropriate list if this isn't properly R-dev.
I have a package on R-forge that shows correct linux and other *nix
builds, but no windows build. The log for the patched version shows the
You seem to have missed the force of the warning in 'Writing R
Extensions'.
If you include *any* Fortrann I/O in your package code, you are at
risk from it interfering with C I/O, whether or not that Fortran I/O
is called.
On some platforms with gfortran, merely loading such a package's
We are currently in the process of implementing PNG and JPEG for
2.13.0, and an extensible architecture is planned for 2.14.0.
On Wed, 23 Mar 2011, Meyer, Sebastian wrote:
Dear R devel,
being constrained to a windows environment at work and having colleagues being
accustomed to the
On Thu, 24 Mar 2011, Ben Bolker wrote:
Ben Bolker bbolker at gmail.com writes:
I have been struggling all day to import a particular function/method
combination (ranef(), which extracts the random effects from a mixed
model fit) from the nlme package into another package ... so far
This is a bug in the package: you are required to quote paths in
Makefiles, e.g. to allow for spaces in the path.
And let's knock the issue of forward and backwards slashes on the
head: they are equivalent on Windows. Despite your perjorative
comments, the supplied value of R_HOME is valid.
After some offline checks, another workaround is to set LC_COLLATE=C,
and we'll arrange for tools::texi2dvi() to do that.
On Tue, 22 Mar 2011, Tobias Verbeke wrote:
On 03/22/2011 08:41 AM, Martin Maechler wrote:
Tobias Verbeketobias.verb...@openanalytics.eu
on Mon, 21 Mar 2011 23:45:33
On Sat, 19 Mar 2011, Rainer Hurling wrote:
Today I installed the newest R develepment branch
R version 2.14.0 Under development (unstable) (2011-03-18 r54866)
on FreeBSD 9.0-CURRENT (amd64). All seems fine so far.
But that is very raw: testing on 2.13.0 alpha would be more useful at
this
We are now starting testing R 2.13.0/alpba/beta/RC and testing and
feedback would be appreciated (whereas reports on problems immediately
after release will try our patience).
Sources are available at
http://cran.r-project.org/src/base-prerelease/
Windows binaries at
We have no position about Fortran 90. We provide the means to specify
an F90 compiler and note that its use is not portable as not all
platforms have one. (A very few are still using gcc3 with g77.)
This simply is not an R issue, and seems specific to your unstated
platform (*PLEASE* do
On Mon, 14 Mar 2011, Sigbert Klinke wrote:
Hi,
I get the same error as mentioned in
http://r.789695.n4.nabble.com/error-in-memCompress-in-make-check-td3318922.html
I try to compile R 2.12.2 under Tinycore 3.5.1 running in VirtualBox 4.0.4.
Since first xz was not installed I must have used
On Sat, 12 Mar 2011, Spencer Graves wrote:
Hello:
What happens in the auto-checks on R-Forge and CRAN with code using
par(ask=TRUE)?
Is this routine, or can it create problems?
The fda package uses ask=TRUE to provide the user with a way to examine
a group of plots. In the
On Fri, 11 Mar 2011, Duncan Murdoch wrote:
On 11/03/2011 1:37 PM, Michael Lawrence wrote:
Thanks for the suggestion, but I don't think that R finalizes all of its
objects when it quits. At least a simple test suggests that on Linux.
Did you use onexit=TRUE? On Windows that appears to
On Tue, 8 Mar 2011, wayne.zh...@barclayscapital.com wrote:
Dear R devel,
I have a C++ app that calls into embedded R to perform some analytic
calculations. When my app encounters a segmentation fault, R always
prints the following crash prompt and asks me to enter an action:
*** caught
On Sat, 5 Mar 2011, Hodgess, Erin wrote:
Dear R Development People:
I was trying to build R-2.12.2 from source on a Windows XP machine.
Doing the make all recommended works fine, but building the bitmap
dll is a problem.
It seems to be in the libpng directory. I got libpng-1.5.1, and
Looks like you should be using finalizers instead. See the RODBC
package for an example of this.
On Fri, 4 Mar 2011, H C Pumphrey wrote:
Dear all,
I'm trying to fix a subtle bug in the hdf5 package. This package provides an
interfaces to the HDF5 library and hence allows one to load data
On Mon, 28 Feb 2011, Prof Brian Ripley wrote:
Unfortunately it would need a major rewrite, and either piping output through
a pager (surely the standard Unix way to handle this) or redirecting to a
file is the simplest way to do this.
R CMD check calls a process to run .runPackageTestsR
On Tue, 1 Mar 2011, Martin Morgan wrote:
On 03/01/2011 03:19 PM, Benilton Carvalho wrote:
Hi,
I have a BioC infra-structure package that works fine (I can build,
check and load it successfully) on revision r53950. The very same
package fails on r54591 with the error below:
Error in
As the help says:
This is subject to the limitations of the OS's corresponding system
call:
E.g. on Fedora 14 'man 2 rename' says, inter alia,
'If newpath already exists it will be atomically replaced (subject to
a few conditions; see ERRORS below), so that there is no point at
Unfortunately it would need a major rewrite, and either piping output
through a pager (surely the standard Unix way to handle this) or
redirecting to a file is the simplest way to do this.
R CMD check calls a process to run .runPackageTestsR, which calls
further processes to run each test and
On Wed, 23 Feb 2011, Hervé Pagès wrote:
I get this (with R-2.12 and R-2.13, didn't try with earlier versions):
max(c(NaN, NA))
[1] NA
max(c(NA, NaN))
[1] NaN
I get the same thing with min().
The fact that the result of 'max(x)' or 'min(x)' depends on the order
of the elements in 'x' is
On Fri, 25 Feb 2011, Koert Kuipers wrote:
Hello all,
I am trying to port the package RProtoBuf to windows. The developers of
RProtoBuf have given me some helpful pointers so far, but now I am stuck.
After having made what I think are the necessary changes to the
package to compile on
residuals() and $residuals are often very different: residuals() is
generic, but even the default method is *not* simple extraction. Their
values can be of different lengths: think about an lm fit with
na.action = na.exclude. That is precisely the sort of thing the tests
in add.R were
On Wed, 23 Feb 2011, Oliver Soong wrote:
I'm having a very odd problem with system(wait = FALSE). I'm not
entirely sure whether it's a bug in R or a problem on our end. It's
related to a post a month or so ago in R-help which got no responses,
but I have a little more to add.
Well, the
So it seems that there is something wrong with the liblzma library
used on that machine. Did it use the version supplied with R or an
external library (which is the default if one is found)? My first
step would be to force the internal version via --with-system-xz=no.
That error appears to
On Tue, 22 Feb 2011, Kjetil Halvorsen wrote:
This question was adsked on R-help-es, and got no responses there.
the OP asked for help pages in english and spanish. Any ideas how this
should be done? I guess there really should be a solution for any number of
languages.
Rcmdr had English and
On Mon, 21 Feb 2011, Thomas Roth wrote:
Dear List,
Recently i changed my environment switching from 32bit XP to 64bit W7. I'm
trying to rebuild my package with R 2.12.1 (2010-12-16)
R CMD check -- everything ok, no warning, error nothing
BUT
R CMD build -- Error in tools::build Vignettes
From the NEWS for 2.13.0-to-be
\item \code{drop.terms} and the \code{[} method for class
\code{terms} no longer add back an intercept. (Reported by
Niels Hansen.)
so it has been fixed, just not rolled out yet.
On Mon, 21 Feb 2011, Terry Therneau wrote:
This arose when
Look a close look at matprod in src/main/array in the R sources.
Hint: it is the other dimensions you have wrong.
And as BLAS is Fortran, counts do start at 1.
On Sat, 19 Feb 2011, Jason Rudy wrote:
Dear R-devel,
I've written a numerical solver for SOCPs (second order cone programs)
in R,
for the help. Now that I have a functioning example I am well
on my way to completing this project.
-Jason
On Sun, Feb 20, 2011 at 7:42 AM, Prof Brian Ripley
rip...@stats.ox.ac.uk wrote:
Look a close look at matprod in src/main/array in the R sources.
Hint: it is the other dimensions you have wrong
On Fri, 18 Feb 2011, Charles Roosen wrote:
Dear all,
I'm having a problem with debugger() in both R 2.8.0 and R 2.12.0.
Probably also versions in-between.
But you are asked to report only on current R.
I don't see it logged in the bug database, but it's hard for me to
imagine that no-one
On Tue, 1 Feb 2011, Joshua Wiley wrote:
Dear List,
With the R 2.12.0 addition of table methods for points(), dotchart()
struggles with tables.
Which of course it is not documented to accept, not even the base type
of such tables, a 1-D array. So this is detecting a previously
undetected
I think you are decades in the future. We are on R 2.12.x in 2011.
It seems that you don't have texi2dvi installed. Either install it
(it may part of the TeX or texinfo distributions) or set
options(texi2dvi='') (see ?tools::texi2dvi and ?EnvVar). 'Tis also
discussed in the R-admin
The most obvious answer is not to do that. You have not used the
standard mechanism to to do that (which should work here as R CMD
INSTALL overrides that one). It's all in ?Startup (look for
R_DEFAULT_PACKAGES).
The simplest way to ignore ~/.Rprofile is to set R_PROFILE_USER to
something
eventually. But a package
would retrofit it to eariier versions of R.
Thanks!
Regards,
Yihui
--
Yihui Xie xieyi...@gmail.com
Phone: 515-294-2465 Web: http://yihui.name
Department of Statistics, Iowa State University
2215 Snedecor Hall, Ames, IA
On Sun, Feb 13, 2011 at 6:30 AM, Prof Brian Ripley
Robin Hankin's post reminded me to post about the following recent
addition to 'Writing R Extensions', in the section on 'Submitting a
package to CRAN'
Ensure that the package sources are not unnecessarily large. ...
As a general rule, doc directories should not exceed 5Mb, and
where
On Sat, 12 Feb 2011, Uwe Ligges wrote:
I think it is easiest to point people to the manual R Internals for
questions on the size of integers, pointers etc.
But ?Memory-limits is a good start.
The messages below (which were not from a current version of R with
that call!) come from
We have a 4-week alpha/beta/RC period every 6 months for testing
before a 2.x.0 release. This is announced here, and we get very
little response. I expect the testing window for R 2.13.0 to be
Mar-Apr.
That said, we do quite extensive testing on the main platforms (ix86
and x86_64 Linux,
On Thu, 10 Feb 2011, Prof Brian Ripley wrote:
There are lots of problems with MCMCpack's C++: the only way (short of a
major rewrite) that you will get it to compile on Solaris is to use g++ (and
even that needs corrections).
The maintainers seem deaf to reports of the issues.
And please
On Thu, 10 Feb 2011, Юрий Посохов wrote:
Dear colleagues!
In early 2009 there was a discussion about fast BLAS library initiated by
Sachin. He reported a faster BLAS library made by Nvidia CUBLAS library. Uwe
Ligges showed an interest for placing the optimized rblas.dll into
windows/contrib
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