Full_Name: Michael Aaron Karsh
Version: 2.8.0
OS: Windows XP
Submission from: (NULL) (75.61.102.255)
Whenever I try changing a function, it keeps coming up with the same error
message.
I have the function
CN_state_log_sum=function(Tot_log_sum){ #estimate copy number state for the log
sum
Full_Name: Niels
Version: = 2.10.0
OS: Windows
Submission from: (NULL) (76.182.102.23)
The reordering option in library gplots : heatmap.2 is broken. Re-ordering of
the dendrogram is supposed to work by providing a vector of ordering weighs in
Rowv. However, the tests in line 131 and 174 are
Well,
swiss.lm
Call:
lm.default(formula = Fertility ~ Education + Examination, data = swiss)
That means the call is registered as lm.default and update calls that
one (and it is hidden in your namespace.
You can fix it on your side so that the call is registered as lm(.)
in the lm
Ah, thanks, now I understand the mode of operation and will work on a more
robust fix than exporting the functions.
Regards, Ulrike
-- Original Message ---
From: Uwe Ligges lig...@statistik.tu-dortmund.de
To: Ulrike Grömping gro...@beuth-hochschule.de
Cc: r-devel@r-project.org
What makes you think this is a bug in R?
Whenever I try changing a function, it keeps coming up with the same
error
message.
I have the function
CN_state_log_sum=function(Tot_log_sum){ #estimate copy number state
for the log
[...]
}
When I try to run it in the loop:
for (j in
I frequently run scripts that generate multiple graphs. Unless you specify a
specific window location, dev.new superimposes all new graphics windows exactly
on top of each other. It would be nice to have a cascade=TRUE option in
dev.new to prevent windows from being hidden. A hasty
Full_Name: Michael Spiegel
Version: 2.10
OS: Windows Vista
Submission from: (NULL) (76.104.24.156)
The following error is produced when attempting to call install.packages. Here
is the results of the traceback:
source('http://openmx.psyc.virginia.edu/getOpenMx.R')
Error in f(res) : invalid
I'm hoping that someone with deeper insight into S4 than I,
that is to say virtually everyone reading this list, could help
resolve the following problem in SparseM. We have
setGeneric(backsolve,
function(r, x, k = NULL, upper.tri = NULL, transpose = NULL,
twice = TRUE, ...)
On 11/4/2009 11:05 AM, michael.m.spie...@gmail.com wrote:
Full_Name: Michael Spiegel
Version: 2.10
OS: Windows Vista
Submission from: (NULL) (76.104.24.156)
The following error is produced when attempting to call install.packages. Here
is the results of the traceback:
On 11/4/2009 11:05 AM, michael.m.spie...@gmail.com wrote:
Full_Name: Michael Spiegel
Version: 2.10
OS: Windows Vista
Submission from: (NULL) (76.104.24.156)
The following error is produced when attempting to call install.packages. Here
is the results of the traceback:
-Original Message-
From: r-devel-boun...@r-project.org
[mailto:r-devel-boun...@r-project.org] On Behalf Of Duncan Murdoch
Sent: Wednesday, November 04, 2009 8:47 AM
To: michael.m.spie...@gmail.com
Cc: r-b...@r-project.org; r-de...@stat.math.ethz.ch
Subject: Re: [Rd] error in
If you mean us to run the code you supplied:
1. There are two generic backsolve() functions, one in the gobal
environment and one in SparseM:
showMethods(backsolve)
Function: backsolve (package .GlobalEnv)
r=ANY
r=matrix
(inherited from: r=ANY)
showMethods(SparseM::backsolve)
Function:
On 11/4/2009 12:15 PM, William Dunlap wrote:
-Original Message-
From: r-devel-boun...@r-project.org
[mailto:r-devel-boun...@r-project.org] On Behalf Of Duncan Murdoch
Sent: Wednesday, November 04, 2009 8:47 AM
To: michael.m.spie...@gmail.com
Cc: r-b...@r-project.org;
Hello,
X - data.frame(letters=letters[1:3], flag=c(TRUE, FALSE, TRUE))
X
letters flag
1 a TRUE
2 b FALSE
3 c TRUE
apply(X, 1, as.list)
[[1]]
[[1]]$letters
[1] a
[[1]]$flag
[1] TRUE
[[2]]
[[2]]$letters
[1] b
[[2]]$flag
[1] FALSE
[[3]]
[[3]]$letters
[1] c
The apply function was meant to work on matrices and arrays, when you use it on
a data frame, the frame is first converted to a matrix. Since your data frame
has columns of different modes, the logical column is converted to character
and the matrix is of the single mode character. That is
I agree it is a good idea, but a new name seems justified to avoid
confusion.
On Wed, 4 Nov 2009, Duncan Murdoch wrote:
On 11/4/2009 12:15 PM, William Dunlap wrote:
-Original Message-
From: r-devel-boun...@r-project.org [mailto:r-devel-boun...@r-project.org]
On Behalf Of Duncan
Well documented in ?as.matrix.
Ignore my previous post.
On Wed, 4 Nov 2009, Greg Snow wrote:
The apply function was meant to work on matrices and arrays, when you use it on
a data frame, the frame is first converted to a matrix. Since your data frame
has columns of different modes, the
On 11/4/2009 12:15 PM, William Dunlap wrote:
-Original Message-
From: r-devel-boun...@r-project.org
[mailto:r-devel-boun...@r-project.org] On Behalf Of Duncan Murdoch
Sent: Wednesday, November 04, 2009 8:47 AM
To: michael.m.spie...@gmail.com
Cc: r-b...@r-project.org;
-Original Message-
From: Prof Brian Ripley [mailto:rip...@stats.ox.ac.uk]
Sent: Wednesday, November 04, 2009 12:19 PM
To: Duncan Murdoch
Cc: William Dunlap; r-de...@stat.math.ethz.ch
Subject: Re: [Rd] error in install.packages() (PR#14042)
I agree it is a good idea, but a new
S4 generics can specify a valueClass. Perhaps that could be used in
those cases.
On Wed, Nov 4, 2009 at 3:24 PM, Duncan Murdoch murd...@stats.uwo.ca wrote:
On 11/4/2009 12:15 PM, William Dunlap wrote:
-Original Message-
From: r-devel-boun...@r-project.org
It looks good on following examples:
z - split(log(1:10), rep(letters[1:2],c(3,7)))
sapply(z, length, FUN.VALUE=numeric(1))
Error in sapply(z, length, FUN.VALUE = numeric(1)) :
FUN values must be of type 'double'
(I'd like the error to say ... must be of type 'double',
not 'integer', to
-Original Message-
From: r-devel-boun...@r-project.org [mailto:r-devel-boun...@r-
project.org] On Behalf Of Stefan Evert
Sent: Wednesday, November 04, 2009 4:40 AM
To: michael_ka...@earthlink.net
Cc: r-b...@r-project.org; r-de...@stat.math.ethz.ch
Subject: Re: [Rd] Cannot Change
-Original Message-
From: William Dunlap
Sent: Wednesday, November 04, 2009 12:53 PM
To: 'Duncan Murdoch'
Cc: r-devel@r-project.org
Subject: RE: sapply improvements
It looks good on following examples:
z - split(log(1:10), rep(letters[1:2],c(3,7)))
sapply(z, length,
-Original Message-
From: r-devel-boun...@r-project.org [mailto:r-devel-boun...@r-
project.org] On Behalf Of Stefan Evert
Sent: Wednesday, November 04, 2009 4:40 AM
To: michael_ka...@earthlink.net
Cc: r-b...@r-project.org; r-de...@stat.math.ethz.ch
Subject: Re: [Rd] Cannot Change
Full_Name: Andy Ashley
Version: 2.10.0
OS: Windows XP SP3
Submission from: (NULL) (91.105.184.105)
I am updating a legacy program which called Rterm from within Excel VBA as
follows:
Rexe = C:\Program Files\R\R-2.4.0\bin\Rterm.exe
Roptions =
env_vars = R_USER= dirname
William Dunlap wrote:
It looks good on following examples:
z - split(log(1:10), rep(letters[1:2],c(3,7)))
sapply(z, length, FUN.VALUE=numeric(1))
Error in sapply(z, length, FUN.VALUE = numeric(1)) :
FUN values must be of type 'double'
(I'd like the error to say ... must be of type
Here is a more stripped down variant generates and error on OS X for me:
mkEg - function(tm) list(scrunge = as.POSIXct(tm))
extract - function(db) {
e- new.env()
lazyLoad(db, e)
as.list( e)
}
eg - mkEg(2009-11-04 12:49:53)
eg1 - mkEg(2009-11-04
-Original Message-
From: Peter Dalgaard [mailto:p.dalga...@biostat.ku.dk]
Sent: Wednesday, November 04, 2009 1:16 PM
To: William Dunlap
Cc: Duncan Murdoch; r-devel@r-project.org
Subject: Re: [Rd] sapply improvements
William Dunlap wrote:
It looks good on following examples:
William Dunlap wrote:
...
if (x = 0) NA else log(x)
variety otherwise.
Would you only want it to coerce upwards to FUN.VALUES's
type? E.g., allow
sapply(z, length, FUN.VALUE=numeric(1))
to return a numeric vector but die on
sapply(z, function(zi)as.complex(zi[1]),
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