want to support the idea of adding such technical papers to
R-news.
===
Jan de Leeuw; Distinguished Professor and Chair, UCLA Department of
Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 8130 Math Sciences Bldg, Box 951554, Los Angeles, CA 90095-1554
setenv CC gcc-3.5
setenv F77 gfortran
setenv CXX g++-3.5
What I had to do.
1. Build a local zlib-1.2.1
2. Compile ppr.f in stats with g77-3.4 and not with gfortran-3.5
3. Change line 1581 in plot.c to
double *aa = REAL(cex);
if (R_FINITE(aa[i % ncex])
i.e. get
I tried R-devel (07/31/04) with
setenv CC gcc-3.5
setenv F77 gfortran
setenv CXX g++-3.5
Here gfortran is g-95, version 3.5, from Gaurav's site.
Configure goes fine, build goes fine, except for problems with
macro-expansion
in plot.c, similar to the one you mention in starma.c. After clobbering
libRlapack.dylib on OS X add the flags -flat_namespace
-undefined suppress to the link.
5. I will post this version of R-1.9.1 (using the X11 version of Tcl/Tk
8.5
and the R version of BLAS and Lapack) on gifi.
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal
-devel
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 8130 Math Sciences Bldg, Box 951554, Los Angeles, CA 90095-1554
phone (310)-825-9550; fax (310)-206-5658; email: [EMAIL PROTECTED]
homepage
Murdoch
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Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 8130
sudo rm /usr/local/lib/libxml2.2.dylib
and try again
On Jun 21, 2004, at 17:35, [EMAIL PROTECTED] wrote:
/usr/local/lib/libxml2.2.dylib
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 8130
this would not work with Cocoa.
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 8130 Math Sciences Bldg, Box 951554, Los Angeles, CA 90095-1554
phone (310)-825-9550; fax (310)-206-5658
. If the
first thing you say is library(tcltk), then the device is
automatically set to quartz, and subsequent calls to
quartz() are fine.
On Feb 21, 2004, at 14:16, Jan de Leeuw wrote:
If you start R from the terminal and then do non-X11 graphics, you
get SetFrontProcess errors. For instance, I have a version
that people who (a) prefer to run their R from the Terminal
or from Emacs,
and (b) who prefer Aqua to X11, should use the first R. Since I am one
of these people,
the next release of R on gifi will have no X11 and no R.app.
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics
://www.stat.math.ethz.ch/mailman/listinfo/r-devel
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 8130 Math Sciences Bldg, Box 951554, Los Angeles, CA 90095-1554
phone (310)-825-9550; fax (310)-206-5658
) definition of _BC
/usr/lib/libncurses.5.dylib(lib_termcap.o) definition of _BC
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 8130 Math Sciences Bldg, Box 951554, Los Angeles, CA 90095-1554
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Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 8130 Math Sciences Bldg, Box 951554, Los Angeles, CA 90095-1554
phone
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 8130 Math Sciences Bldg, Box 951554, Los Angeles, CA 90095-1554
phone (310)-825-9550; fax (310)-206-5658; email: [EMAIL PROTECTED]
homepage
8.4.4.
If you want to do this take care to configure and build the tcl/tk
sources from inside the unix directory.
stefano
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Jan de Leeuw; Professor and Chair
.
===
library(tcltk)
tkStartGUI()
demo(tkdensity) in tkStartGUI
works OK in RAqua. Hack !
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 8130 Math Sciences
This works fine in R-patched in Darwin.
On Oct 14, 2003, at 23:02, Laurent Gautier wrote:
help.search(prompt, agrep=F)
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 8130 Math Sciences
only link libLapack.dylib
by adding -flat_namespace -undefined suppress to the linker
flags. These are somewhat mysterious.
I am attaching config.site.
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US
).
This is important, because people report speed increases of
100-200% compared to gcc/g77.
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 8130 Math Sciences Bldg, Box 951554, Los Angeles, CA 90095-1554
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Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 8130 Math
/build tseries for MacOSX?
It seems like there is the same problem with symbols duplications. The
-m like option does not seem to help.
stefano
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Jan de Leeuw
and explain why we
see -lcc_dynamic often passed as an ld flag.
Where to find doc on this?
stefano
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Jan de Leeuw; Professor and Chair, UCLA Department
/Tk.framework/Versions/Current/Headers
I know that the two TCLTK variables (strangely enough), the DEBUGGING
variable and the FPICFLAGS are necessary.
I am using the g77-3.3 from fink -- not the one from Gaurav Khanna, the
fink one
comes with a patched assembler.
===
Jan de Leeuw; Professor
/Library/Frameworks/Tk.framework/Versions/Current/Headers
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 9432 Boelter Hall, Box 951554, Los Angeles, CA 90095-1554
phone (310)-825-9550; fax (310
With the current version from rsync (8/16, 19:00) I get
make[3]: *** No rule to make target `helpsearch.c', needed by
`Makefile'. Stop.
make[2]: *** [R] Error 1
make[1]: *** [R] Error 1
make: *** [R] Error 1
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal
of Washington, Seattle
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 9432 Boelter Hall, Box 951554, Los Angeles, CA 90095-1554
phone (310)-825-9550; fax (310)-206-5658; email: [EMAIL
specifying
--gui-aqua. Nothing has changed!
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 9432 Boelter Hall, Box 951554, Los Angeles, CA 90095-1554
phone (310)-825-9550; fax (310)-206-5658; email
will appear probably on wednesday. Undoubtedly
some packages will break, because they still use stuff from /sw,
but I'll fix those as we go along.
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail
, at 08:47 US/Pacific, Stefano Iacus wrote:
On Domenica, giu 15, 2003, at 02:39 Europe/Rome, Jan de Leeuw wrote:
Does not use -L/sw/lib -dl anymore, so only works for those who have
libdl in /usr/local/lib
Cannot find _environ in linking libR.dylib (not sure where it
normally
gets it). Does not seem
:
On Sun, 15 Jun 2003, Jan de Leeuw wrote:
No, but if you do not have dlcompat in /usr/local/lib, you also get
link errors because it cannot find dlopen and friends. So one need
a dlcompat somewhere where the linker can find it.
Not finding environ must be due to some very recent change in the
R code
--with-aqua
if you have aquatcl/tk it should work fine. I'll try it tomorrow as it
is too late now :)
stefano
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Jan de Leeuw; Professor and Chair
I would wait to see what Apple comes up with in the next
installment of Developer Tools.
--- J.
On Sunday, Jun 1, 2003, at 03:07 US/Pacific, Kurt Hornik wrote:
Jan de Leeuw writes:
The new g77 in fink/unstable is 3.3. It fails to build R, unless
I setenv LDFLAGS to -lcc_dynamic
:267)
#58 0x18c0 in start
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical Software
US mail: 9432 Boelter Hall, Box 951554, Los Angeles, CA 90095-1554
phone (310)-825-9550; fax (310)-206-5658; email: [EMAIL
And compiles, and passes make check. I will continue to experiment
with two-level namespaces (and perhaps with weak linking) but in
a private copy only.
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
what
goes on in a separate version of R-devel.
===
Jan de Leeuw; Professor and Chair, UCLA Department of Statistics;
Editor: Journal of Multivariate Analysis, Journal of Statistical
Software
US mail: 9432 Boelter Hall, Box 951554, Los Angeles, CA 90095-1554
phone (310)-825-9550; fax (310)-206-5658
:
Jan de Leeuw writes:
The OS X configure in R-devel has been changed to use two-level
namespaces. There are still some problems.
3. Configure does not pass the $(Rexecbindir) to the Makefiles in the
/src/library directory, so the links cannot find the bundle_loader. I
added them by hand for all
()
r.library(tcltk)
r.demo(tkdensity)
This all works. You get the Aqua Tk widgets and the plotting in the
quartz device. Windows can be brought to the foreground, minimized to
the
dock, and widgets can be operated with the mouse. No X11 is required
at all.
===
Jan de Leeuw; Professor and Chair, UCLA
of headers and libs are
defined explicitly.
On Tuesday, February 25, 2003, at 12:06 AM, [EMAIL PROTECTED] wrote:
On Mon, 24 Feb 2003, Jan de Leeuw wrote:
The OS X configure in R-devel has been changed to use two-level
namespaces. There
are still some problems.
1. Trunmed.c in the modreg packages defines
includes
then I think you should expect no X includes to be found, no?
Brian
On Thu, 1 Jan 1970, Jan de Leeuw wrote:
As for the tcl/tk, I actually configured without pointing to
tclConfig.sh
and tkConfig.sh at all, but putting TCLTK_LIBS and TCLTK_CPPFLAGS
in the environment.
I could try to use
The OS X configure in R-devel has been changed to use two-level
namespaces. There
are still some problems.
1. Trunmed.c in the modreg packages defines a function heapsort(),
while heapsort
is also defined (differently) in /usr/lib/stdlib.h. I (temporarily)
disabled the
definition in stdlib.h.
, Professor
Biology Department
University of Massachusetts Amherst
Amherst MA 01003
http://www.bio.umass.edu/biology/kunkel/
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