[R] Grouped Boxplot

Dear all, I need some help with plotting boxplots in groups. I have a file of the following format: - POS DISONODE_CAT -- A20Hubs C30Nonhubs B50

Re: [R] reading files

0.7910863 #5 A_nonhubs_B_nonhubs 0.4926012 #6B_hubs_B_nonhubs 0.6350055 A.K. - Original Message - From: anupam sinha anupam.cont...@gmail.com To: r-help@r-project.org Cc: Sent: Tuesday, September 3, 2013 6:58 AM Subject: [R] reading files Dear all, I need help with some coding

[R] reading files

Dear all, I need help with some coding. I have a directory with files like these: A_hubs A_nonhubs B_hubs B_nonhubs : : Each of these files have the following header and content: GENE TIS_DEG TOT_SVTIS_SVTIS_DISO ensg1 20 12 4 40 . . and so

[R] line plot over a barplot

Dear all, I have data in the following format : X-axisY-axis 010% 0-20 20% 20-4030% 40-6040% . and so on. I want to plot a bar graph of the above. Also I would want to add a trendline passing either through the

[R] overlapping linear plots

Hi all, Is there any way to plot multiple linear models(lm) on the same window. I have data in the following format where I would like get a log-log plot between 3rd column and 4th column and fit a straight line through the points. The problem is that I have multiple files with such a

[R] Error while installing 'netmodels'

] tcltk_2.9.0 tools_2.9.0 Detecting remotely related proteins by their Error: unexpected symbol in Detecting remotely interactions and sequence similarity Error: unexpected symbol in interactions and Regards, Anupam Sinha [[alternative HTML version deleted

Re: [R] Directory operations

, Uwe Ligges lig...@statistik.tu-dortmund.de wrote: On 09.01.2010 19:04, anupam sinha wrote: Hi Jim, Thanks for your suggestion. I tried scripting but gives me an error. Can you tell me what am I doing wrong here ? * list.files()-org_xml_dirs Please do turn that arrow

Re: [R] Directory operations

you want to search. A list.files on that directory will give you the list of file names that you can then process. On Fri, Jan 8, 2010 at 12:41 PM, anupam sinha anupam.cont...@gmail.comwrote: Dear all, I have this directory structure : Dir1 Dir2 Dir3 Dir4

[R] Directory operations

). What I want to do is to enter into the first directory read all the xml files do certain operations come out of the directory and do the same thing for another directory. Can anyone help me out ? Thanks in advance for any suggestions. Regards, Anupam Sinha [[alternative HTML version

[R] Problems in plotting with abline

. Regards, Anupam Sinha [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented

Re: [R] Problems in plotting with abline

,met_eco_bet) abline(lmout) Regards, Alain anupam sinha wrote: Dear R-users, I am using R(a package igraph) to calculate certain topological features of networks. When I try to draw a plot between these features I get an error. Following is the code I am using : * plot

[R] Fitting a trend-line

Hi all, I am new to R. How does one go about fitting a trend-line to a scatter plot? Any help is appreciated. Thanks and regards, Anupam [[alternative HTML version deleted]] __ R-help@r-project.org mailing list

Re: [R] Fitting a trend-line

Thanks a lot for all your suggestions. Regards, Anupam [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide

[R] problem with ls command

and this is true for any package. Can anything be done ? Regards, Anupam Sinha, Graduate Student, Laboratory of Computational Biology, Centre for DNA fingerprinting and Diagnostics Hyderabad, India - 51 [[alternative HTML version deleted]] __ R

[R] Unable to load R

or directory* I have checked for the presence of the above mention library and found that the library is present. I have run out of ideas. Can anyone help me out??? I will be greatly indebted. Cheers, Anupam Sinha, Graduate Student, Lab of Computational Biology, Centre for DNA Fingerprinting

Re: [R] Unable to load R

% |=| 1.3 kB 00:00 Setting up Install Process Parsing package install arguments Package readline - 5.1-1.1.x86_64 is already installed. Package readline - 5.1-1.1.i386 is already installed. Nothing to do Plzz help me out. Cheers, Anupam Sinha On Thu, May 28, 2009 at 11:54 AM, Zeljko

[R] Unable to install R package

Hi all, I am unable to install R package on RHEL version 5.1. While running * ./configure* command following is printed on to the screen and no * makefile* is created. Can anyone help me out ??? Thanks in advance. ./configure checking build system type... x86_64-unknown-linux-gnu

Re: [R] R-help Digest, Vol 74, Issue 20

in advance. Regards, Anupam Sinha [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented

[R] Problems with old version of R

in advance. Anupam Sinha [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal