Re: [R] barplots - text direction

2005-08-24 Thread Patrick Connolly
, beside = T, legend = colnames(h), horiz = T, xlim = c(0, 5), | las=1) | | will do it. | | Note: colnames(h) not colnames(g) And note that rownames(h) will give a more sensible legend. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

[R] Lattice key seems to ignore the key list

2005-09-06 Thread Patrick Connolly
in there that would set auto.key to TRUE? The space and columns part of the list seems to be ignored and the autokey values substituted. Ideas, please. Thanks. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

[R] How does biplot.princomp scale its axes?

2006-07-31 Thread Patrick Connolly
, mention is made of ... many variations on biplots. Would I be doing something inexcusable if I ignored the differences I've noticed here? TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great

[R] Colours in silhouette plots (cluster package)

2006-08-10 Thread Patrick Connolly
-- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_Middle minds discuss events (:_~*~_:)Small minds discuss people

Re: [R] How to iteratively extract elements out of a list

2006-08-26 Thread Patrick Connolly
, function(x)x[x4]) | sub4.m[unlist(lapply(sub4.m, function(x) length(x) 0))] | [[1]] | [1] 5 Or slightly shorter in this case: sub.m[sapply(sub.m, function(x) length(x) == 2)] etc. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly

[R] R CMD INSTALL with debugging

2006-09-13 Thread Patrick Connolly
be an added bonus. TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_Middle minds discuss events (:_~*~_:)Small

[R] Using assign() function as I did in Splus

2006-09-28 Thread Patrick Connolly
? TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_Middle minds discuss events (:_~*~_:)Small minds discuss

Re: [R] [R-pkgs] New versions of Matrix and lme4 packages for R-2.4.0

2006-10-07 Thread Patrick Connolly
have superior knowledge and understanding of a particular field, (http://dictionary.reference.com/search?q=cognoscenti) -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas

Re: [R] Intro to R: lecture presentation

2004-10-26 Thread Patrick Connolly
-specific constructs. Even if I condescend to use IE, I get only a message: 404 Error: File not found Perhaps it moved?! -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have

Re: [R] scatterplot of 100000 points and pdf file format

2004-11-24 Thread Patrick Connolly
of 160mm square, this pdf printed unpixelated. Depending on what size (dimensions) you need to finish up with, you might find you could get away with a lower resolution than 300 dpi, but I usually find 200 too ragged. HTH -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815

Re: [R] How about a mascot for R?

2004-12-02 Thread Patrick Connolly
of which I don't recall, was a response to someone voicing the opinion that the said animal was an Helk. Rather witty in my view and has a spirit in keeping with this list. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

[R] Removing trailing spaces

2004-12-21 Thread Patrick Connolly
(). There are ways I could do it with substring(), but I seem to remember there was something more elegant. I can find the strip function in the clim.pact package, but that trims everything after the first space which is not useful in this case. Someone please refresh my memory. TIA -- Patrick Connolly

Re: [R] Removing trailing spaces

2004-12-21 Thread Patrick Connolly
On Tue, 21-Dec-2004 at 05:19PM -0600, Marc Schwartz wrote: | On Wed, 2004-12-22 at 11:38 +1300, Patrick Connolly wrote: | Some years ago when I used S-PLUS, I seem to remember, there was a | discussion about a simple method of removing trailing spaces from | vector elements. I'd be fairly

Re: [R] 3d bar plot

2005-01-19 Thread Patrick Connolly
, that's not important in a world where form takes precedence over substance which I think is what is called the real world. Dejectedly yours, -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

[R] New problem printing °C in plots

2005-02-01 Thread Patrick Connolly
problem, or does it have to do with changes in R-2.x.x? TIA -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all

Re: [R] New problem printing °C in plots

2005-02-01 Thread Patrick Connolly
en_NZ.utf8, | and so 2.1.0 will in a couple of months. I've found that simply using the string \260C instead of Emacs's trick works both in X11 and postscript, so I'll survive until then -- though I kind of miss that bit of WYSIWYG. Thanks -- Patrick Connolly HortResearch Mt Albert Auckland New

[R] Lattice tick labels not all appearing

2005-02-17 Thread Patrick Connolly
year 2004 month11 day 15 language R -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s

Re: [R] help on deleting NAs

2005-02-17 Thread Patrick Connolly
4 3 1 2 The function in the tapply part could be made more general if 3 doesn't always constitute a majority. HTH -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have

[R] Examples of multiple key grobs

2005-02-17 Thread Patrick Connolly
functions, so I don't have much of a sense of how grobs are constructed. I've been unable to find examples of code used to do multiple keys and would appreciate being pointed in the direction of some. TIA -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

Re: [R] help on deleting NAs

2005-02-20 Thread Patrick Connolly
i | can modify and make the first one work, just curious. Try an as.character() with the factor. HTH -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest

[R] Control of vertical spacing in Lattice key text?

2005-03-15 Thread Patrick Connolly
dozens of them. Is there something in the documentation I overlooked? TIA -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep

[R] Regex engine types

2006-06-09 Thread Patrick Connolly
describing it, I'd be interested to know. Thanks -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_Middle minds discuss events

[R] princomp and prcomp confusion

2006-06-26 Thread Patrick Connolly
-- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_Middle minds discuss events (:_~*~_:)Small minds discuss people (_)-(_) . Anon

[R] Address of FactoMineR package author

2006-06-29 Thread Patrick Connolly
-- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_Middle minds discuss events (:_~*~_:)Small minds discuss people (_)-(_) . Anon

Re: [R] Very slow read.table on Linux, compared to Win2000 [Broad cast]

2006-06-29 Thread Patrick Connolly
window manager. I'd suspect you're using a light one. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_Middle minds discuss events

[R] use of NULL environment is deprecated?

2006-07-11 Thread Patrick Connolly
. Is there an analagous way of looking into warnings? TIA -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_Middle minds discuss events

Re: [R] use of NULL environment is deprecated?

2006-07-11 Thread Patrick Connolly
. Will saving the objects anew overcome the problem? (Thanks Sundar also.) -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_Middle minds

[R] weights argument in the lmer function in lme4

2006-01-30 Thread Patrick Connolly
such results? TIA -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world ... Perhaps you`ve seen

Re: [R] Vectors of years, months, and days to dates?

2004-06-07 Thread Patrick Connolly
(y,m,d, sep=-))) [1] 2.65 0.03 2.68 0.00 0.00 ymd.to.POSIXlt benefits from repeated, but the as.POSIXlt method doesn't. I even tried it again with a new R process and got the same sort of thing? What makes the difference? -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph

Re: [R] off topic publication question

2004-06-08 Thread Patrick Connolly
We when referring to a purportedly group decision that was really made by one individual who is attempting to hide that fact. In the case of an author, the attempt could be to appear more modest. We are not all prima donnas. :-) -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand

[R] Quirks with system.time and simulations

2004-06-13 Thread Patrick Connolly
on comparing processing times which is something that happens from time to time. In the comparison that gave rise to the code above, the order would have made a substantial difference to the perceived effectiveness of Richard's code. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph

Re: [R] Quirks with system.time and simulations

2004-06-13 Thread Patrick Connolly
been done before. Evidently, things are very different there. Best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep

Re: [R] Resolution of plots

2004-06-17 Thread Patrick Connolly
. I don't follow. Is that in relation to the function bitmap()0 or to png()? -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I

Re: [R] Tick marks in xyplot

2004-06-23 Thread Patrick Connolly
it be to make mgp one of the 'relevant components'? I often find I'd like to decrease the mgp[2] setting. I think that's the only reason why I'd like to have mgp in the list, so if there's a smarter way of achieving that, mgp would be unnecessary. Is there a smarter way? -- Patrick Connolly

Re: [R] A way to list only variables or functions?

2004-06-23 Thread Patrick Connolly
for me as it is, so in that sense, it ain't broke. However, if anyone is interested in having such functionality my code could be a good starting point. Best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

Re: [R] Numbers as symbols

2004-06-28 Thread Patrick Connolly
)) | | nums -as.character(Question) | plot(Performance, Importance, xlab='Graph', | ylab='',pch=nums, axes=T) Try this instead: plot(Performance, Importance, xlab='Graph', ylab='',pch= , axes=T, adj = 0) text(Performance, Importance, text=nums) HTH -- Patrick Connolly HortResearch Mt Albert

Re: [R] Sorting elements in a data.frame

2004-06-29 Thread Patrick Connolly
them, there could be better ways but I've done enough guessing for now. HTH -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep

Re: [R] naive question

2004-06-29 Thread Patrick Connolly
, it will save you typing in all those numeric strings. HTH -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches

Re: [R] how to drop rows from a data.frame

2004-06-30 Thread Patrick Connolly
SEKH0002 SEKH0003 SEKH0004 SEKH0005 1 256.1139 256.1139 256.1139 256.1139 256.1139 2 283.0741 695.1000 614.5117 453.0342 500.1436 3 257.3578 305.0818 257.3578 257.3578 257.3578 8 257. 257. 257. 257. 257. 9 305.7857 2450.0417 335.5428 305.7857 584.2485 HTH -- Patrick Connolly

[R] Transparent backgrounds in png files

2004-07-28 Thread Patrick Connolly
month06 day 21 language R Thanks. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest

Re: [R] Transparent backgrounds in png files

2004-07-29 Thread Patrick Connolly
On Thu, 29-Jul-2004 at 08:38AM +0100, Prof Brian Ripley wrote: | The bitmap() device does not support transparency. The png() device does. Unfortunately, though png() does a fine job at a transparent background, it's rather lumpy even on a screen. | | On Thu, 29 Jul 2004, Patrick Connolly

Re: [R] labels on secondary y axis

2004-08-25 Thread Patrick Connolly
be using. mtext is your friend. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world

Re: [R] R2.1.0: X11 font at size 14 could not be loaded

2005-04-28 Thread Patrick Connolly
system i686, linux-gnu status major2 minor1.0 year 2005 month04 day 18 language R Something to do with the patch, perhaps? -- Patrick Connolly HortResearch Mt

[R] Bias to do with search engines

2005-05-18 Thread Patrick Connolly
before it. Somehow, southern hemisphere sites aren't taken as seriously as those from that other hemisphere. Is there a word for that type of bias? -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

[R] lme4 package and importIntoEnv errors

2005-05-23 Thread Patrick Connolly
) in a different place from the normal ones. Could that be a source of error on this system? Alternatively, is there anything I could do about this namespace business? best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

Re: [R] lme4 package and importIntoEnv errors

2005-05-24 Thread Patrick Connolly
with a new version of Matrix. Douglas's post explains why lme4_0.95-8.tar.gz is so much smaller than lme4_0.8-2.tar.gz. I feel much less confused now. Thank you Renaud Lancelot and Deepayan Sarkar also. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

Re: [R] R GUI for Linux?

2005-05-30 Thread Patrick Connolly
. best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world ... Perhaps you`ve seen

Re: [R] reading non-existing files

2005-06-07 Thread Patrick Connolly
to empty files. ?try will be a good place to start. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches

Re: [ESS] Re: [R] Strange characters in 2.1.0?

2005-06-08 Thread Patrick Connolly
On Wed, 08-Jun-2005 at 11:20AM +0200, Martin Maechler wrote: | PaCo == Patrick Connolly [EMAIL PROTECTED] | on Wed, 8 Jun 2005 11:31:44 +1200 writes: | | PaCo On Tue, 07-Jun-2005 at 04:10PM +0200, Martin Maechler wrote: | PaCo | Dan == Dan Bolser [EMAIL PROTECTED] | | PaCo

Re: [R] ^ operation much slower in R 1.7.1 than in R 1.7.0 ???

2003-08-09 Thread Patrick Connolly
-- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world ... Perhaps you`ve seen it. ---Steven Wright

Re: [R] for those of you who want a patent...

2003-08-19 Thread Patrick Connolly
. Reckon I'll stick to contour plots rather than pay a licensing fee for diamond graphs. [thinks maybe the way I use contour plots is unique ... maybe I should bung in a patent application] -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

[R] Encapsulated postscript and the family argument

2003-08-24 Thread Patrick Connolly
to understand what's happening here. best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world

Re: [R] Encapsulated postscript and the family argument

2003-08-25 Thread Patrick Connolly
On Mon, 25-Aug-2003 at 08:03AM +0100, Prof Brian Ripley wrote: | On Mon, 25 Aug 2003, Patrick Connolly wrote: | | version [...] | However, what wasn't obvious to me was that it is necessary to specify | what family to use. If no family is specified, the default family | does appear

Re: [R] Re: diamond graphs and patents

2003-08-28 Thread Patrick Connolly
, then 'wide use' could result and the university would benefit. But that's a big IF. best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection

[R] Omitting blank lines with read.table

2003-09-23 Thread Patrick Connolly
use na.omit since the other NAs in the data can be dealt with so I don't want them removed. Other suggestions welcome. Thanks -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have

Re: [R] ISOdate returns incorrect date?

2003-11-19 Thread Patrick Connolly
ISOdate output. best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world ... Perhaps you`ve

Re: [R] ISOdate returns incorrect date?

2003-11-19 Thread Patrick Connolly
effect dates before 2nd March. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world

[R] 1.8.1 and subsetting dataframes

2003-11-24 Thread Patrick Connolly
using a text connection instead or creating a temporary file in my work around? -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I

Re: [R] 1.8.1 and subsetting dataframes

2003-11-24 Thread Patrick Connolly
On Mon, 24-Nov-2003 at 11:36PM +0100, Peter Dalgaard wrote: | Patrick Connolly [EMAIL PROTECTED] writes: | | I've encountered something that didn't arise using earlier versions of | R (Linux). | | A dataframe is created and new columns added to it by doing | calculations using apply

[R] grid packages since R-1.7.1

2003-12-04 Thread Patrick Connolly
the rest of the project with 1.7.1, but I'd like to be tidier than that. Ideas appreciated. Thanks -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest

Re: [R] grid packages since R-1.7.1

2003-12-07 Thread Patrick Connolly
On Thu, 04-Dec-2003 at 11:23PM -0600, Deepayan Sarkar wrote: | On Thursday 04 December 2003 21:19, Patrick Connolly wrote: [...] | options(defaultPackages = c(mva, lattice), keep.source.pkgs = TRUE) | | It's rather unlikely that I should specifically load grid also, but | | That's exactly

Re: [R] R and file size

2003-01-12 Thread Patrick Connolly
major1 minor6.1 year 2002 month11 day 01 language R Something simple, no doubt, but nothing I can see. Ideas welcome. -- Patrick Connolly HortResearch Mt Albert Auckland New

Re: [R] R and file size

2003-01-12 Thread Patrick Connolly
On Mon, 13-Jan-2003 at 01:13PM +1300, Patrick Connolly wrote: | On Tue, 07-Jan-2003 at 10:52AM +, [EMAIL PROTECTED] wrote: | | | On Mon, 6 Jan 2003, Greg Blevins wrote: | | | | Something simple, no doubt, but nothing I can see. Simple alright. For some unexplained reason, I had another

[R] Why are default sizes of plotting characters different?

2003-01-14 Thread Patrick Connolly
to set the size to 0.8 using size = unit(.8, char). Now they end up looking quite similar even if not identical. Evidently, the default values have different bases. What is the thinking behind those defaults? thanks -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9

[R] X11 device now needs to be explicitly started?

2003-01-15 Thread Patrick Connolly
behaviour by design or fault? best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world

[R] Please begin a new subject if your post isn't a response to a previous one

2003-01-27 Thread Patrick Connolly
and it's quicker than scrolling through an address book. It's also quicker than deleting the previous subject. Your cooperation will be greatly appreciated. best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

[R] model.tables limitations

2003-03-31 Thread Patrick Connolly
: Error in replications(paste(~, paste(names(tables), collapse = +)), : na.action must be a function Could it simply be that na.action = na.omit doesn't make it through, or should I be looking somewhere else? best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64

Re: [R] draft of posting guide. Sorry.

2003-12-23 Thread Patrick Connolly
suggestion. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world ... Perhaps you`ve seen

Re: [R] ? data.entry read-only ?

2004-01-12 Thread Patrick Connolly
as Gnome. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world ... Perhaps you`ve seen

[R] Binomial glms with very small numbers

2004-01-14 Thread Patrick Connolly
it be more appropriate to treat the response as an ordered factor with four levels? If so, what family would one use? TIA -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s

Re: [R] Binomial glms with very small numbers

2004-01-14 Thread Patrick Connolly
think it would make a difference but I included it in case someone more knowledgeable had reasons why it did. Thanks. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world

Re: [R] Some more help needed...

2004-01-19 Thread Patrick Connolly
deal to run a separate R session in another workspace (or even better, viewport in the pre-Gnome2 days) where such ancillary tasks can run. There are OS limitations, of course. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

Re: [R] Date Time Conversion problems...

2004-02-04 Thread Patrick Connolly
$Date - as.POSIXct(strptime(as.character(data2$Date),format=%m/%d/%Y)) You'll find that it prints the date labels more usefully in 1.8.1 HTH -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

[R] How to get time differences in consistent units?

2004-02-12 Thread Patrick Connolly
-2.96 compiler) best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world ... Perhaps you`ve

Re: [R] adding header info to write.table

2004-02-26 Thread Patrick Connolly
532 | nrows 999 | xllcorner 510465 | yllcorner 4766375 | cellsize 30 | NODATA_value - ?write then use append = TRUE when using write.table HTH -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

Re: [R] R-business case

2004-03-16 Thread Patrick Connolly
. Such meters are almost, but not quite completely useless -- rather like Arthur Dent's attempts at getting a cup of tea from the Nutrimatix drink dispenser. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

Re: [R] Why is rpart() so slow?

2004-03-18 Thread Patrick Connolly
give us an indication of just what you're trying to do, with what, and to what, so we would be in a position to say what improvements could be made. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

Re: [R] Problems with postscript output

2004-03-24 Thread Patrick Connolly
the axis.cex a tad (assuming the missing ones are not more than 3 letters). HTH -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep

Re: [R] stop() vs. error() ?

2004-03-28 Thread Patrick Connolly
) : Is this an error? HTH -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world ... Perhaps you

Re: [R] Index of a Loop Variable?

2004-04-06 Thread Patrick Connolly
the names of a list instead of the indexes. For example, you can use the part of the list identified by its name without needing to know what its index is. for(i in names(xx)){ do.something(xx[[i]], ...) etc } But if it's the index you need, the answer would be No. HTH -- Patrick Connolly

Re: [R] Line numbers in error messages

2004-04-12 Thread Patrick Connolly
don't | want to have to run a debugger except when there is a real problem, not | just some silliness. In my experience, it silliness 99% of the time. Best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188

Re: [R] Size of R user base

2004-04-19 Thread Patrick Connolly
your 4th edition of a certain S-Plus / R book from what comes next? -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all

Re: [R] POSIXct vs Dates

2004-04-22 Thread Patrick Connolly
. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world ... Perhaps you`ve seen it. ---Steven

Re: [R] high resolution images for publication

2005-10-17 Thread Patrick Connolly
and would be generally preferred | over the above. For publishers who insist on TIFF format, it should be noted that despite the fact that they're very large, they compress well and can be decompressed by the publisher. best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9

Re: [R] Subsetting a list

2005-10-20 Thread Patrick Connolly
X2 X3 X4 1 1, 2, 3, 4, 5 1, 2, 31, 2, 3, 4, 5 1, 2, 3 2 1, 2 1, 2, 3, 4, 5 1, 2, 3, 4, 5, 6 1 3 1, 2 1, 2 1, 2, 3, 41, 2 best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x

[R] kinship package example data

2005-11-06 Thread Patrick Connolly
if there is a real dataframe called d10, and if not, what sort of relationship does upn have to the dadid and momid? Thank you. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have

Re: [R] kinship package example data

2005-11-06 Thread Patrick Connolly
. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world ... Perhaps you`ve seen it. ---Steven

Re: [R] question about precision, floor, and powers of two.

2005-11-08 Thread Patrick Connolly
97 98 0.00e+00 98 99 0.00e+00 99 100 0.00e+00 Is there a pattern? -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells

[R] Tidiest way of modifying S4 classes?

2005-11-14 Thread Patrick Connolly
standardGeneric, by class genericFunction Class nonstandardGenericFunction, by class genericFunction Class groupGenericFunction, by class genericFunction If I want a new plot.pedigree function, do I make a slot, or what is the approach to take? Suggestions most welcome. Thanks -- Patrick Connolly

Re: [R] behavior of names

2005-12-05 Thread Patrick Connolly
=as.vector(x[b])) HTH -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world ... Perhaps you`ve

Re: [R] R is GNU S, not C.... [was how to get or store .....]

2005-12-06 Thread Patrick Connolly
-project.org/posting-guide.html | | | __ | R-help@stat.math.ethz.ch mailing list | https://stat.ethz.ch/mailman/listinfo/r-help | PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Patrick Connolly HortResearch Mt Albert

Re: [R] R is GNU S, not C.... [was how to get or store .....]

2005-12-06 Thread Patrick Connolly
not mixed. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world ... Perhaps you`ve seen

Re: [R] Age of an object?

2005-12-15 Thread Patrick Connolly
, I'll gladly provide ideas. best -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I keep it on all the beaches of the world

Re: [R] Space between axis label and tick labels

2006-01-11 Thread Patrick Connolly
code, I'm not clear on what you've tried, but you might need to check out the axis function as well. HTH -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest

[R] Canonical Variance Analysis by any other name?

2006-01-18 Thread Patrick Connolly
someone has a package for doing it. What other name might I search for? Thnx -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph: +64-9 815 4200 x 7188 ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~ I have the world`s largest collection of seashells. I

Re: [R] Canonical Variance Analysis by any other name?

2006-01-19 Thread Patrick Connolly
as variance, but that might not be the case. Perhaps SAS likes to use different terminology. Thank you Brian for the wikipedia link. It doesn't have anything relating to canonical variance analysis which seems to support my suspicions. -- Patrick Connolly HortResearch Mt Albert Auckland New Zealand Ph

[R] Redhat compilers and lme4 with R-2.4.0

2006-10-18 Thread Patrick Connolly
-- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_Middle minds discuss events (:_~*~_:)Small minds discuss people

Re: [R] Redhat compilers and lme4 with R-2.4.0

2006-10-19 Thread Patrick Connolly
obvious once you know, of course. -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_Middle minds discuss events

[R] Which executable is associated with R CMD INSTALL?

2006-10-30 Thread Patrick Connolly
-- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_Middle minds discuss events (:_~*~_:)Small minds discuss people (_)-(_) . Anon

Re: [R] Which executable is associated with R CMD INSTALL?

2006-10-31 Thread Patrick Connolly
) -- ~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~. ___Patrick Connolly {~._.~} Great minds discuss ideas _( Y )_Middle minds discuss events (:_~*~_:)Small minds discuss people

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