Hi,
if anyone else would have problem with non-diploids and poppr, install
developmental version from the GIThub repository. Many thanks to authors for
pointing me right direction and writing this nice package. :-)
All the best,
Vojtěch
Dne Po 9. června 2014 14:36:23 jste napsal(a):
Hi,
I
Hi,
I like the poppr package very much. And I like microstallites and don't like
AFLP. ;-) I found a problem with some tree constructing.
When I run bruvo.boot, it crashes at some random point:
ssrs3n.nj.bruvo - bruvo.boot(pop=ssrs3n.missingno, replen=rep(2, 8),
sample=100, tree=upgma,
: r-sig-phylo-boun...@r-project.org
[r-sig-phylo-boun...@r-project.org] on behalf of Gilles Benjamin Leduc
[g...@hi.is] Sent: 29 May 2014 17:12
To: Vojtěch Zeisek
Cc: mailinglist R
Subject: Re: [R-sig-phylo] Triploid microsatellites?
Hi,
Yes it is possible in R
-project.org [r-sig-phylo-boun...@r-project.org]
on behalf of Vojtěch Zeisek [vo...@trapa.cz] Sent: 30 May 2014 10:17
To: mailinglist R
Subject: Re: [R-sig-phylo] Triploid microsatellites?
Hello,
thank You both. poppr looks interesting, I need to explore it more.
Adegenet is famous package. I
From: r-sig-phylo-boun...@r-project.org [r-sig-phylo-boun...@r-project.org] on
behalf of Vojtěch Zeisek [vo...@trapa.cz]
Sent: 30 May 2014 10:17
To: mailinglist R
Subject: Re: [R-sig-phylo] Triploid microsatellites?
Hello,
thank You both. poppr looks interesting, I need
-project.org [r-sig-phylo-boun...@r-project.org]
on behalf of Gilles Benjamin Leduc [g...@hi.is] Sent: 29 May 2014 17:12
To: Vojtěch Zeisek
Cc: mailinglist R
Subject: Re: [R-sig-phylo] Triploid microsatellites?
Hi,
Yes it is possible in R, there is a package created for related
: [R-sig-phylo] Triploid microsatellites?
Hi,
Yes it is possible in R, there is a package created for related purposes:
poppr or something like that⦠The dev version on github should be
preferred. I have seen several R work with polyploids and microsatelites,
unfortunately⦠I work
Hi,
Yes it is possible in R, there is a package created for related purposes:
poppr or something like that… The dev version on github should be preferred.
I have seen several R work with polyploids and microsatelites, unfortunately… I
work with ALFP :p
Benjamin
Le Jeudi 29 Mai 2014
From: r-sig-phylo-boun...@r-project.org [r-sig-phylo-boun...@r-project.org] on
behalf of Gilles Benjamin Leduc [g...@hi.is]
Sent: 29 May 2014 17:12
To: Vojtěch Zeisek
Cc: mailinglist R
Subject: Re: [R-sig-phylo] Triploid microsatellites?
Hi,
Yes it is possible
