Re: [Rdkit-discuss] support for Postgres 11 ?

2019-07-04 Thread Greg Landrum
In the meantime we (=I) can also try doing conda builds for more recent versions. -greg On Mon, Jul 1, 2019 at 8:26 PM Paolo Tosco wrote: > Hi John, > > yes, it is, I have myself compiled the RDKit PostgreSQL cartridge against > Postgres 11. > > It should just be a matter of adding the

Re: [Rdkit-discuss] support for Postgres 11 ?

2019-07-04 Thread Greg Landrum
FWIW: there are already postgresql 10 builds up: (rdkit_psql10) glandrum@otter:/scratch/RDKit_git/build$ conda list | grep postgr postgresql10.5 h1ad7b7a_0 rdkit-postgresql 2019.03.3.0 hc51617d_0rdkit Assuming everything works, I should have

Re: [Rdkit-discuss] Error from qed

2019-07-04 Thread Paolo Tosco
Hi Navid, based on the adjacency matrix that you reported the first molecule has the following topology: i.e., it features an oxygen atom with 3 valences, plus a disconnected oxygen (the last one in the node). That molecule makes little chemical sense to me - it looks like some sort of

Re: [Rdkit-discuss] Error from qed

2019-07-04 Thread Greg Landrum
Yeah, to reinforce what Paolo said: we're not going to be able to help unless you show us the code that you're using that's producing the error. -greg On Thu, Jul 4, 2019 at 11:00 AM Paolo Tosco wrote: > Hi Navid, > > based on the adjacency matrix that you reported the first molecule has the