Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-14 Thread Dima Pasechnik
Thanks. Now the only conclusion we have about 10.15 that it's hard to predict the outcome of building Sage on it... On Mon, Oct 14, 2019 at 7:42 AM David Coudert wrote: > > Since it’s cleaner, I tried, and after a make distclean and the removal of > MacOSX10.14.sdk, I was able to build Sage ! >

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-14 Thread David Coudert
Since it’s cleaner, I tried, and after a make distclean and the removal of MacOSX10.14.sdk, I was able to build Sage ! Thanks, David. > Le 14 oct. 2019 à 01:29, Volker Braun a écrit : > > I just tried the latest Xcode and gfortran fails to build for me, too... > > > -- > You received this

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread Volker Braun
I just tried the latest Xcode and gfortran fails to build for me, too... > >> -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread Dima Pasechnik
On Sun, 13 Oct 2019, 20:57 David Coudert, wrote: > > > Le 13 oct. 2019 à 20:24, Dima Pasechnik a écrit : > > On Sun, Oct 13, 2019 at 4:57 PM David Coudert > wrote: > > > It’s working ! I can now complete compilation. > > Thanks both of you for the help. > > Now I have to remember to remove

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread David Coudert
> Le 13 oct. 2019 à 20:24, Dima Pasechnik a écrit : > > On Sun, Oct 13, 2019 at 4:57 PM David Coudert > wrote: >> >> It’s working ! I can now complete compilation. >> >> Thanks both of you for the help. >> >> Now I have to remember to remove MacOSX10.14.sdk

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread Dima Pasechnik
On Sun, Oct 13, 2019 at 4:57 PM David Coudert wrote: > > It’s working ! I can now complete compilation. > > Thanks both of you for the help. > > Now I have to remember to remove MacOSX10.14.sdk when it will no longer be > needed, but when… hmm, so does this mean that you didn't do a full

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread David Coudert
It’s working ! I can now complete compilation. Thanks both of you for the help. Now I have to remember to remove MacOSX10.14.sdk when it will no longer be needed, but when… David. > Le 13 oct. 2019 à 17:32, Isuru Fernando a écrit : > > You have the same issue as

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread Isuru Fernando
You have the same issue as https://github.com/sagemath/binary-pkg/issues/19 Can you try downloading 10.14 SDK from https://github.com/phracker/MacOSX-SDKs/releases/download/10.14-beta4/MacOSX10.14.sdk.tar.xz extracting it inside

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread David Coudert
No, but MacOSX10.15.sdk confetti:lib dcoudert$ ll /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk ls: /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk: No such file or directory

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread Isuru Fernando
Hi, Do you have the folder /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk ? Isuru On Sun, Oct 13, 2019 at 10:14 AM David Coudert wrote: > here it is. > > confetti:lib dcoudert$ /Users/dcoudert/sage3/sage/local/bin/gfortran >

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread David Coudert
here it is. confetti:lib dcoudert$ /Users/dcoudert/sage3/sage/local/bin/gfortran -print-prog-name=ld ld confetti:lib dcoudert$ /Users/dcoudert/sage3/sage/local/bin/gfortran -v Using built-in specs. COLLECT_GCC=/Users/dcoudert/sage3/sage/local/bin/gfortran

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread Isuru Fernando
Hi, This is a problem with gfortran using an incorrect linker. Can you post the output of, /Users/dcoudert/sage3/sage/local/bin/gfortran -print-prog-name=ld /Users/dcoudert/sage3/sage/local/bin/gfortran -v Isuru On Sun, Oct 13, 2019 at 8:21 AM David Coudert wrote: > confetti:lib

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread David Coudert
confetti:lib dcoudert$ otool -L libfflas.dylib libfflas.dylib: /Users/dcoudert/sage3/sage/local/lib/libfflas.1.dylib (compatibility version 2.0.0, current version 2.0.0) /Users/dcoudert/sage3/sage/local/lib/libgivaro.9.dylib (compatibility version 11.0.0, current version 11.1.0)

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread Dima Pasechnik
oops sorry, your gfortran is ok. how about fflas* package, it is probably broken... On Sun, 13 Oct 2019, 14:17 Dima Pasechnik, wrote: > are you building gfortran in Sage, or using a prebuilt one? > > it might be that its libgfortran got broken > > On Sun, 13 Oct 2019, 13:01 David Coudert,

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread Dima Pasechnik
are you building gfortran in Sage, or using a prebuilt one? it might be that its libgfortran got broken On Sun, 13 Oct 2019, 13:01 David Coudert, wrote: > > > confetti:lib dcoudert$ pwd > > /Users/dcoudert/sage3/sage/local/lib > > confetti:lib dcoudert$ otool -L libgfortran.dylib > >

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread David Coudert
confetti:lib dcoudert$ pwd /Users/dcoudert/sage3/sage/local/lib confetti:lib dcoudert$ otool -L libgfortran.dylib libgfortran.dylib: /Users/dcoudert/sage3/sage/local/lib/libgfortran.4.dylib (compatibility version 5.0.0, current version 5.0.0)

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread Dima Pasechnik
I gather that the error comes from one of -ldfftpack -lfftpack -lgfortran being incorrectly linked/broken. please locate the relevant lib*.dylib files (in SAGE_LOCAL?) and run "otool -L" on each of them to see if they are OK. On Sun, Oct 13, 2019 at 12:43 PM David Coudert wrote: > > it's an

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread David Coudert
it's an incremental build from 9.0.beta0. I upgraded my OS in July after a system crash. So I had to reinstall everything from scratch. In case, I have Xcode Version 11.1 (11A1027). Le dimanche 13 octobre 2019 13:29:21 UTC+2, Dima Pasechnik a écrit : > > Is this a build from scratch? > (after

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread Dima Pasechnik
Is this a build from scratch? (after an OS upgrade, incremental builds may break) On Sun, Oct 13, 2019 at 12:19 PM David Coudert wrote: > > > > Le dimanche 13 octobre 2019 12:53:02 UTC+2, Dima Pasechnik a écrit : >> >> We have already seen that puzzling >> >> ld: library not found for -lSystem

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread David Coudert
Le dimanche 13 octobre 2019 12:53:02 UTC+2, Dima Pasechnik a écrit : > > We have already seen that puzzling > > ld: library not found for -lSystem > > error message. > > Is there a /usr/lib/libSystem.dylib present? > Yes: confetti:sage dcoudert$ ll /usr/lib/libSystem.dylib lrwxr-xr-x 1

Re: [sage-devel] Error installing scipy-1.2.0 when compiling sage math 9.0.beta1

2019-10-13 Thread Dima Pasechnik
We have already seen that puzzling ld: library not found for -lSystem error message. Is there a /usr/lib/libSystem.dylib present? If yes, then I guess this means a broken dependency of scipy, more specifically, a broken dylib, built along the way. or Xcode that needs to be reinstalled... Can