Hi,
I will attend ICML and probably COLT too. Not sure about a sprint but
definitely up for a scikit-learn lunch / dinner.
See you in NYC,
Mathieu
On Tue, Apr 19, 2016 at 6:00 AM, Alexandre Gramfort <
alexandre.gramf...@telecom-paristech.fr> wrote:
> hi Andy,
>
> there is no plan at this time t
Another remark is that you set C=1e3. Depending on the scaling of your
data, this can be quite large. This means that the SVM is very lightly
regularized (=> hard SVM) and therefore the problem is ill-conditioned.
Mathieu
On Thu, Apr 21, 2016 at 11:51 PM, Mathieu Blondel
wrote:
> By d
By default, SVC stops only when the desired tolerance is reached. If the
problem is poorly scaled, this can indeed take ages. You can however set
max_iter to prevent this.
http://scikit-learn.org/stable/modules/generated/sklearn.svm.SVC.html
We might want to change the default from -1 to somethin
You may also want to save your model using joblib (possibly with
compression enabled) instead of cPickle.
Mathieu
On Sun, Apr 10, 2016 at 9:13 AM, Piotr Płoński wrote:
> Hi All,
>
> I am saving RandomForestClassifier model from sklearn library with code
> below
>
> with open('/tmp/rf.model', 'w
And also in LinearSVC with dual=True. The only difference is that the
choice of dual variable is cyclic (with prior permutation) instead of
random.
See this 2008 paper:
http://www.csie.ntu.edu.tw/~cjlin/papers/cddual.pdf
Mathieu
On Sun, Apr 10, 2016 at 9:53 PM, Alexandre Gramfort <
alexandre.gra
Dear scikit-learners,
The scikit-learn team is happy to announce the creation of
scikit-learn-contrib, a github organization for gathering high-quality
scikit-learn compatible projects.
https://github.com/scikit-learn-contrib
scikit-learn-contrib currently includes two projects:
- lightning: ht
Hi Daniel,
I think CW is a bit outdated and also a bit too specific (it supports only
the hinge loss). Algorithms like Adagrad are more generic. Thus, I think CW
is not a good candidate for inclusion in scikit-learn.
That said, I would welcome a contribution in lightning:
https://github.com/sciki
With lightning, you can train linear models on large-scale data using
recent state-of-the-art optimization algorithms which are too cutting-edge
for including in scikit-learn (e.g., SDCA or SAGA). If you just want to
train a logistic regression on 1000 samples, you don't need lightning :)
Mathieu
Related issue:
https://github.com/scikit-learn/scikit-learn/issues/3652
On Tue, Mar 22, 2016 at 6:32 AM, Jacob Schreiber
wrote:
> It should if you're using those parameters. It's basically similar to
> calculating the regularization path for LASSO, since these are also
> regularization terms. I
If this function is generally useful, it might be a good idea to make it
public.
Mathieu
On Wed, Mar 9, 2016 at 1:29 AM, Ariel Rokem wrote:
>
> On Mon, Mar 7, 2016 at 8:24 AM, Andreas Mueller wrote:
>
>> Hi Ariel.
>> We are not storing them any more because of memory issues, but you can
>> rec
ts._svmlight_format._load_svmlight_file
> (sklearn\datasets\_svmlight_format.c:2055)
>
> ValueError: could not convert string to float:
>
>
>
> But this time, it does not show any value after the error. Its blank.
> Any idea why this is happening?
>
>
> Gunjan
>
Hi Gunjan,
Apparently the dataset is multi-label, so you need to use the
multilabel=True option.
http://scikit-learn.org/stable/modules/generated/sklearn.datasets.load_svmlight_file.html
Mathieu
On Fri, Feb 12, 2016 at 10:04 PM, Gunjan Dewan
wrote:
> Hi all,
>
> I am using the following datas
I guess knowing the max alpha is useful to know where to start your grid
search from. However, I think deriving max alpha for NMF should be more
difficult since the problem is non-convex.
Mathieu
On Wed, Feb 3, 2016 at 7:40 AM, Vlad Niculae wrote:
> Hi James,
>
> I'm not sure how useful a minim
How do you plan to represent variable-length time series? Lists of 1d numpy
arrays work but would be slow I guess. The ideal representation needs to be
compatible with grid search and fast.
Mathieu
On Mon, Dec 7, 2015 at 10:35 AM, Dan Shiebler wrote:
> Hello,
>
> I’m not sure if this is the cor
ng
> it for the future.
> On Nov 6, 2015 04:05, "Mathieu Blondel" wrote:
>
>> It's a pity that people who contributed to the release are not listed
>> anymore.
>>
>> Of course, congrats to everyone involved and in particular to our release
>>
It's a pity that people who contributed to the release are not listed
anymore.
Of course, congrats to everyone involved and in particular to our release
managers :)
M.
On Fri, Nov 6, 2015 at 9:45 AM, Andreas Mueller wrote:
> Hey everybody.
>
> I'm happy to announce the release of scikit-learn
I've seen logistic regression used in a regression setting in a few papers
as well. A nice thing is that the predictions are mapped to [0, 1].
The correct way to add this to scikit-learn would be to add a regression
class `LogisticRegressor` and rename the existing class to
`LogisticClassifier`. T
M, Andreas Mueller wrote:
>
>
> On 09/08/2015 06:42 AM, Mathieu Blondel wrote:
>
>> Pearson correlation between y_true and y_pred is also a standard
>> evaluation metric in genomic selection. In a sense, it can be seen as a
>> ranking measure since y_true and y_pred d
Pearson correlation between y_true and y_pred is also a standard evaluation
metric in genomic selection. In a sense, it can be seen as a ranking
measure since y_true and y_pred don't need to be equal: they only need to
be collinear to achieve perfect correlation.
+1 for adding pearson_correlation_
On Sun, Aug 30, 2015 at 7:27 AM, Yaroslav Halchenko
wrote:
>
> As long as installation is straightforward, I think it should be a minor
> hurdle. It will be by default (Recommends) installed with scikit-learn,
> pymvpa,
> and any other related package I am maintaining in Debian/Ubuntu. It is
> a
Hi,
Making it easier to properly cite relevant papers is something I would also
really like to see addressed!
I am a bit concerned that most people wouldn't want or wouldn't be able to
install an external program, though. For this reason, I think the ideal
solution should be web based. This could
Hi Othman,
Please send such comments to the mailing-list.
Thanks,
Mathieu
On Tue, Aug 18, 2015 at 10:03 PM, Othman Soufan
wrote:
> Greetings Guys,
>
> First of all, I want to thank you for the nice efforts you put in this
> very usable case of building and training models i.e. the case of many
On Thu, Jul 30, 2015 at 11:38 PM, Andreas Mueller wrote:
> I am mostly concerned about API explosion.
> I take your point of PDF vs PMF.
> Maybe predict_proba(X, y) is better.
> Would you also support predict_proba(X, y) for classifiers (which would be
> predict_proba(X)[np.arange(len(y)), y]) ?
7/29/2015 02:58 AM, Jan Hendrik Metzen wrote:
> >>>> Such a predict_proba_at() method would also make sense for Gaussian
> >>>> process regression. Currently, computing probability densities for GPs
> >>>> requires predicting mean and standard deviation (via
He was asking about Linear Discriminant Analysis, not Latent Dirichlet
Allocation.
Mathieu
On Thu, Jul 30, 2015 at 7:58 PM, Stylianos Kampakis <
stylianos.kampa...@gmail.com> wrote:
> Hi Sebastian,
>
> LDA is unsupervised. Supervised PCA finds components correlated with the
> response variable.
Regarding predictions, I don't really see what's the problem. Using GLMs as
an example, you just need to do
def predict(self, X):
if self.loss == "poisson":
return np.exp(np.dot(X, self.coef_))
else:
return np.dot(X, self.coef_)
A nice thing about Poisson regression is tha
http://arxiv.org/abs/1301.3781
Submitted on 16 Jan 2013, last revised 7 Sep 2013
https://www.google.com/patents/US9037464
Filed on 15 March 2013
On Thu, Jul 2, 2015 at 4:03 AM, Matthieu Brucher wrote:
> 2015-07-01 19:43 GMT+01:00 Andreas Mueller :
> >
> >
> > On 07/01/2015 02:42 PM, Lars Buitin
On Wed, Jul 1, 2015 at 8:43 PM, Dale Smith wrote:
> Apparently so; here is a python/cython implementation.
>
>
>
> http://rare-technologies.com/deep-learning-with-word2vec-and-gensim/
>
word2vec is *not* deep learning. The skip-gram model has been shown
recently to reduce to a certain matrix fa
For unsupervised models that take a long time to train, such as deep
learning or word2vec based feature extractors, this can be pretty useful.
Regardless, a major issue is that we still haven't figured out how to
robustly solve model persistence.
Mathieu
On Wed, Jul 1, 2015 at 4:53 AM, Andreas M
To maximize accuracy, n_estimators should ideally be as high as possible,
yet we would like to use a reasonable value to limit training and
prediction times. The new warm_start option is a nice way to incrementally
add more trees until you reach a satisfying accuracy.
Warm start in linear models i
https://github.com/scikit-learn/scikit-learn/pull/804
Thanks for working on this!
Mathieu
On Sun, Jun 7, 2015 at 6:11 AM, Andy wrote:
> Hi all.
> I vaguely remember there once was an idea to add a page to the
> documentation that shows all the different models and their
> characteristics.
> Wa
Sounds like a good idea.
PR welcome.
Mathieu
On Fri, Jun 5, 2015 at 8:41 PM, Jaidev Deshpande wrote:
> Hello,
>
> I noticed that the cosine similarity function calls safe_sparse_dot, and
> makes it produce a dense output. Would it be a good idea to expose the
> dense_output argument of safe_sp
Last time I checked, liblinear didn't support sample weights, just class
weights (one for positive samples and another for negative samples).
Mathieu
On Tue, Apr 21, 2015 at 5:56 AM, iBayer wrote:
> Hi,
> I was surprised to read that class weights are implemented via sampling
> for LogisticReg
On Mon, Apr 6, 2015 at 12:00 AM, Andy wrote:
> Hi Sebastian.
> First off, if this is a classification algorithm with sum of squared
> errors, you can just do it using linear regression + OvRClassifier, right?
>
This is also what RidgeClassifier does, only in a smarter way (Cholesky
decomposition
On Wed, Apr 1, 2015 at 4:05 AM, Vlad Niculae wrote:
> Hi Gael,
>
> > On 31 Mar 2015, at 14:01, Gael Varoquaux
> wrote:
> >
> >> Why do you think the GP route is easier?
> >
> > Because we already have GPs.
>
We have a GP implementation but it's being rewritten...
> Well, we already have rando
On Sat, Mar 28, 2015 at 9:25 AM, Sturla Molden
wrote:
> Mathieu Blondel wrote:
>
> > What is the best way to detect whether this functionality is available?
> (in
> > order to write code which works with older versions of SciPy too)
>
> To write code that works wit
This is really nice. Thanks for the heads up!
What is the best way to detect whether this functionality is available? (in
order to write code which works with older versions of SciPy too)
Is there online documentation yet?
Thanks,
Mathieu
On Sat, Mar 28, 2015 at 12:46 AM, Sturla Molden
wrote:
a custom metric, and
> Spectral Clustering and Affinity Propagation can work with a [n_samples,
> n_samples] affinity matrix.
>
> On Thu, Mar 26, 2015 at 12:08 PM, Mathieu Blondel
> wrote:
>
>>
>>
>> On Thu, Mar 26, 2015 at 5:49 PM, Artem wrote:
>>
>>>
On Thu, Mar 26, 2015 at 5:49 PM, Artem wrote:
> 1. Right, forgot to add that parameter. Well, I can apply an RBF kernel to
> get a similarity matrix from a distance matrix inside transform.
>
> 2. Usual transformer returns neither distance, nor similarity, but
> transforms the input space so that
other methods mention this
> approach, too.
>
> Added an example to the proposal
> <https://github.com/scikit-learn/scikit-learn/wiki/GSoC-2015-Proposal:-Metric-Learning-module#api>.
> Names are a bit awkward, but couldn't think of better ones.
>
> On Thu, Mar 26, 2015
posal to melange tomorrow, so if you have
> comments — please reply.
>
> Also, if some of previous objections were not addressed, please repeat
> them. I might have missed something.
>
> On Wed, Mar 25, 2015 at 5:05 AM, Mathieu Blondel
> wrote:
>
>> I think the problem w
The part I am most enthusiastic about is fixing the CV generators, though
this could be a merge nightmare since we are in the process of changing the
API. We need it to figure out which modifications are most likely to get in
first.
Lars did some work on semi-supervised naive bayes. Since this is
I think the problem with matrix-like Y is that Y would be symmetric. Thus
for doing cross-validation one would need to select both rows and columns.
This is why I suggested to add a _pairwise_y property like the _pairwise
property that we use in kernel methods, e.g.,
https://github.com/scikit-learn
Hi Lucas,
Instead of creating a new thread every time, it would be nice if you could
reply directly in the same thread. This would make the discussion easier to
follow.
(To do so you need to be fully subscribed to the ML. I'm guessing you may
be subscribed to the digest version)
Thanks,
M.
On W
The cosine similarity and Pearson correlation are the same if the data is
centered but are different in general.
The routine in SciPy is between two vectors; metrics in scikit-learn are
between matrices.
So +1 to add Pearson correlation to scikit-learn.
On Mon, Mar 23, 2015 at 3:24 PM, Gael Va
I skimmed through this survey:
http://arxiv.org/abs/1306.6709
For methods that learn a Mahalanobis distance, as Artem said, we can indeed
compute the Cholesky decomposition of the learned precision matrix and use
it to transform the data. Thus in this case metric learning can be seen as
supervised
How about we meet at ICML 2015 in Lille?
I am personally planning to attend, although I might be a bit too tired for
coding :).
Mathieu
On Fri, Mar 13, 2015 at 4:10 PM, Nelle Varoquaux
wrote:
> > There will also be a larger sprint in summer, right?
>
> If people are not too bored of Paris, why
On Tue, Mar 10, 2015 at 12:01 PM, Andy wrote:
> On 03/09/2015 10:44 PM, Joel Nothman wrote:
>
> Congratulations! This has been a long time coming, and if not only for the
> swathe of features it'll be great to see the documentation improvements
> appearing on stable soon!
>
> My thoughts on dev
> not real.
>
> On Mon, Feb 23, 2015 at 6:35 PM, Andy wrote:
>
>> So indeed in the perceptron update yi_pred is {-1, 1}, not real, in
>> sklearn, right?
>>
>>
>>
>> On 02/23/2015 08:35 AM, Mathieu Blondel wrote:
>>
>> Rosenblatt's Perceptron
Rosenblatt's Perceptron is a special case of SGD, see:
https://github.com/scikit-learn/scikit-learn/blob/master/sklearn/linear_model/tests/test_perceptron.py
The perceptron loss leads to sparser weight vectors than the hinge loss in
the sense that it updates the weight vector less aggressively (on
On Fri, Feb 20, 2015 at 6:57 AM, Andy wrote:
> You give the roc_auc_score the result of "predict". You should give it
> the result of "predict_proba".
>
> This came up already quite a bit, not sure how we can avoid people making
> this mistake.
>
We can encourage people to use the scorer API mo
Use the source, Luke
https://github.com/scikit-learn/scikit-learn/blob/master/sklearn/grid_search.py#L540
M.
On Thu, Feb 19, 2015 at 7:24 AM, Pagliari, Roberto
wrote:
> When different parameter configurations produce the same CV score, how
> does sklearn select the best parameters (I’m mostly
A grid-search related project could be useful:
- multiple metric support (e.g., find the best model w.r.t. f1 score and
the best model w.r.t. AUC)
- data independent cv iterators (
https://github.com/scikit-learn/scikit-learn/issues/2904)
- anything else?
Mathieu
On Thu, Feb 12, 2015 at 5:53 PM,
+1 on the CCA / PLS refactoring, but this would require a student who is
already well versed on these subjects. Mentoring could be an issue as well.
Mathieu
On Thu, Feb 12, 2015 at 4:14 PM, Gael Varoquaux <
gael.varoqu...@normalesup.org> wrote:
> On Thu, Feb 12, 2015 at 02:10:11AM -0500, Ronnie
On Thu, Dec 25, 2014 at 4:59 AM, Andy wrote:
> I recently read about the approximation and I think it would be a great
> addition.
> Do you think it makes sense to include it via an ``algorithm`` paramter to
> tSNE?
> I totally agree with what Kyle said about demonstrating speedups and
> approx
As you mentioned popular methods from scikit-learn-contrib could be
promoted to scikit-learn.
Conversely, methods which became obsolete in scikit-learn could move to
scikit-learn-contrib to lower the maintenance burden.
Mathieu
On Thu, Dec 4, 2014 at 12:26 AM, Mathieu Blondel
wrote:
>
>
> On Wed, Dec 3, 2014 at 5:25 AM, Joel Nothman
> wrote:
>
>>
>> I agree. We should ammend this sentence to say that if the paper is an
>>> clear-cut improvement on top of a very used method, it should be
>>> examinded.
>>
>>
>> Done <h
A compromise would be to just implement the Cython routine in a separate
file, while sharing the same file for the pure Python side.
That said, using a separate class for Adagrad would allow to get rid of
irrelevant hyper-parameters. Some code from the SGD module can probably be
factorized and OVR
On Wed, Dec 3, 2014 at 4:09 PM, Joel Nothman wrote:
> Hi Tom,
>
> Anyone is welcome to publish their implementations in a format compatible
> with scikit-learn's estimators. However, the centralised project already
> takes a vast amount of work (almost all of it unpaid) to maintain, even
> while
On Sat, Nov 29, 2014 at 11:33 AM, Aaron Staple
wrote:
> Hi Mathieu,
>
> Thanks for the information you’ve provided about the ridge implementation
> and your suggestions for scoring rankings.
>
> First off, I’d like to try and contain the scope of the project I’m
> working on. Would it be reasonab
I forgot to mention that in "Ridge", decision_function is an alias for
predict, precisely to allow grid searching against AUC and other ranking
metrics.
M.
On Sat, Nov 29, 2014 at 12:50 AM, Mathieu Blondel
wrote:
>
>
> On Sat, Nov 29, 2014 at 12:29 AM, Michael Eickenberg
assume that all regressors
inherit from RegressorMixin.
M.
Michael
>
> On Fri, Nov 28, 2014 at 4:05 PM, Mathieu Blondel
> wrote:
>
>> Here's a proof of concept that introduces a new method "predict_score":
>>
>> https://github.com/mblondel/scikit-lea
side the
scorer to detect if an estimator is a regressor and use predict instead of
predict_proba / decision_function. This assumes that the estimator inherits
from RegressorMixin and therefore, the code must depend on scikit-learn.
M.
On Fri, Nov 28, 2014 at 7:40 PM, Mathieu Blondel
wrote:
>
On Fri, Nov 28, 2014 at 5:14 PM, Aaron Staple
wrote:
> [...]
> However, I tried to run a couple of test cases with 0-1 predictions for
> RidgeCV and classification with RidgeClassifierCV, and I got some error
> messages. It looks like one reason for this is that
> LinearModel._center_data can con
On Wed, Nov 26, 2014 at 2:37 AM, Andy wrote:
>
> What I think would be great to have is gradient based optimization of
> the kernel parameters
+1
This is one of the most appealing features of GPs IMO.
Mathieu
--
Downl
Hi,
Anyone from the mailing-list going to NIPS this year?
See you there,
Mathieu
--
Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server
from Actuate! Instantly Supercharge Your Business Reports and Dashboard
Different metrics require different inputs (results of predict,
decision_function, predict_proba). To avoid branching in the grid search
and cross-validation, we thus introduced the scorer API. A scorer knows
what kind of input it needs and calls predict, decision_function,
predict_proba as needed.
In addition to out-of-bag scores and multi-metric grid search, there is
also LOO scores in the ridge regression module, as pointed out by Michael.
Option 4 seems like the best option to me.
We keep __call__(self, estimator, X, y) for backward compatibility and
because it is sometimes more conveni
On Sat, Oct 4, 2014 at 1:09 AM, Andy wrote:
>
> I'm pretty sure that is wrong, unless you use the "decision_function"
> and not "predict_proba" or "predict".
> Mathieu said "predict" is used. Then it is still like a (very old
> school) neural network with a thresholding layer,
> and not like a li
-27 4:51 GMT+02:00 Mathieu Blondel :
> > This is because LinearSVC doesn't support sample_weight.
> >
> > I added a new issue for raising a more explicit error message:
> > https://github.com/scikit-learn/scikit-learn/issues/3711
> >
> > BTW, a linear co
aboost.
And it doesn't seem to improve upon a single linear SVM, see the link
below. I used SVC(kernel="linear") since it supports sample_weight.
http://mblondel.org/images/adaboost.png
M.
On Sat, Sep 27, 2014 at 3:22 PM, Andy wrote:
> On 09/27/2014 04:51 AM, Mathieu Blondel wrote
On Fri, Sep 19, 2014 at 5:32 AM, Pagliari, Roberto
wrote:
> When using train_test_split, is the output a reference to the input data,
> or a deep copy?
>
Well, try to modify the output and see if the original data got modified.
Then you get the answer to your question.
M.
--
This is because LinearSVC doesn't support sample_weight.
I added a new issue for raising a more explicit error message:
https://github.com/scikit-learn/scikit-learn/issues/3711
BTW, a linear combination of linear models is a linear model itself. So you
can't learn a better model than a LinearSVC(
`CDClassifier` in my project lightning supports group-lasso for multi-class
classification:
http://www.mblondel.org/lightning/generated/lightning.classification.CDClassifier.html#lightning.classification.CDClassifier
Groups are defined as the class weights for each feature and cannot be
changed.
On Sun, Sep 21, 2014 at 2:04 AM, Olivier Grisel
wrote:
> 2014-09-20 8:04 GMT-07:00 Mathieu Blondel :
> >
> > I recently re-implemented gradient boosting [2].
>
> I am interested in your feedback in implementing trees with numba. Is
> it easy to reach the speed the sciki
On Sun, Sep 21, 2014 at 1:55 AM, Olivier Grisel
wrote:
> On a related note, here is an implementeation of Logistic Regression
> applied to one-hot features obtained from leaf membership info of a
> GBRT model:
>
>
> http://nbviewer.ipython.org/github/ogrisel/notebooks/blob/master/sklearn_demos/In
Hi Ken,
On Sun, Sep 21, 2014 at 4:16 AM, c TAKES wrote:
>
> Understandable that scikit-learn wants to focus on more mature algorithms,
> so perhaps I'll spend my efforts more on writing a python wrapper for
> Johnson and Zhang's implementation of RGF, at least for now. Personally I
> do think i
cision
> tree algorithms.
>
> Ken
>
>
>
>
>
>
>
> On Tue, Sep 16, 2014 at 11:16 AM, Peter Prettenhofer <
> peter.prettenho...@gmail.com> wrote:
>
>> The only reference I know is the Regularized Greedy Forest paper by
>> Johnson and Zhang [1]
>&
Andy,
Indeed, this will mostly depend on the number of public utils we have.
However, using submodules can help structure our public utils.
M.
On Wed, Sep 17, 2014 at 6:32 PM, Andy wrote:
> On 09/15/2014 03:40 PM, Mathieu Blondel wrote:
>
>> lightning is using the fol
Could you give a reference for gradient boosting with fully corrective
updates?
Since the philosophy of gradient boosting is to fit each tree against the
residuals (or negative gradient) so far, I am wondering how such fully
corrective update would work...
Mathieu
On Tue, Sep 16, 2014 at 9:16 AM
rator
@deprecated_util to automate the task.
Mathieu
On Sat, Sep 13, 2014 at 11:22 AM, Mathieu Blondel
wrote:
> We should survey what other packages use. I'll have a look at what
> lightning uses later.
>
> Mathieu
>
> On Sat, Sep 13, 2014 at 2:23 AM, Andy wrote:
>
&g
gt; everything ^^)
>
> Also we need to add utils to the References then.
> No idea how to decide what should be public and what not, though.
>
>
>
> On 09/08/2014 04:01 PM, Mathieu Blondel wrote:
>
> Maintaining backward compatibility for a subset of the utils only means
On Mon, Sep 8, 2014 at 11:55 PM, Gilles Louppe wrote:
> I am rather -1 on making this a transform. There has many ways to come
> up with proximity measures in forest -- In fact, I dont think
> Breiman's is particularly well designed.
>
I think this is actually an argument for non-inclusion in th
This could be a transform method added to RandomForestClassifier /
RandomForestRegressor.
On Mon, Sep 8, 2014 at 11:14 PM, Gilles Louppe wrote:
> Hi Luca,
>
> This may not be the fastest implementation, but random forest
> proximities can be computed quite straightforwardly in Python given
> our
Maintaining backward compatibility for a subset of the utils only means
that from now on we will have to decide whether an util deserves to be
public or not. While we are at it, I would rather make it explicit and use
an underscore prefix for private utils and no prefix for public utils.
This can b
> Is there any other way through which I can
train GradientBoostingRegressor for this dataset?
No, not yet.
However, our implementation of gradient boosting has a `subsample` option
for using a subset of the data when building each tree (this is called
stochastic gradient boosting in the literatu
from the network.
>
>
> 2014-08-31 10:56 GMT+02:00 Mathieu Blondel :
>
> Do you store zero entries explicitly in your CSV format? CSV doesn't
>> strike me as the best choice for representing sparse data...
>>
>> M.
>>
>>
>> On Sun, Aug 31, 2014
Do you store zero entries explicitly in your CSV format? CSV doesn't strike
me as the best choice for representing sparse data...
M.
On Sun, Aug 31, 2014 at 5:21 PM, Eustache DIEMERT
wrote:
> @Lars, shouldn't the last line of the for loop be
>
> indptr.append(indptr[-1]+len(nonzero))
>
> rat
There was a thread on the mailing-list a while ago on instance reduction
methods.
It was decided to not include such methods for the time being as changing
n_samples is not supported by transformers or pipelines.
It is also not clear yet how such methods would play with grid search, for
instance.
I believe random subspace ensembles are subsumed by the BaggingClassifier /
BaggingRegressor estimators. See the class documentation. The proportion of
features used is controlled by max_features.
M.
On Mon, Aug 18, 2014 at 8:51 AM, Dayvid Victor
wrote:
> Hello Everybody,
>
> I was looking for
sample_weights in scikit-learn comes from a libsvm patch:
http://www.csie.ntu.edu.tw/~cjlin/libsvmtools/#weights_for_data_instances
So it would seem like probability calibration was omitted from this patch
:-(
When our calibration module is ready, we could handle the calibration
post-processing o
On Fri, Jul 25, 2014 at 1:46 AM, Alexandre Gramfort <
alexandre.gramf...@telecom-paristech.fr> wrote:
>
> indeed but squared loss is cheap to use and can reach pretty good
> classif performance in practice.
>
Indeed the squared loss works surprisingly well in practice for
classification and it ha
On Thu, Jul 24, 2014 at 2:46 PM, Pagliari, Roberto
wrote:
> I also tried to import sparse.LinearSVC, but it says svm has no module
> named sparse….
>
>
>
I don't know where you get your documentation but sparse.LinearSVC has been
removed like 3 years ago... :-)
Mathieu
--
statsmodel has a GLM module but apparently no beta regression.
There is also a scikit-learn compatible wrapper around the GLM module here:
https://github.com/jcrudy/glm-sklearn
Mathieu
On Mon, Jul 21, 2014 at 10:54 PM, Gavin Gray wrote:
> Checking the documentation it looks like Scikit-learn
AUC (area under the roc curve) is commonly used for imbalanced binary
classification problems.
The AUC is the probability that your classifier will rank a positive sample
higher than a negative sample (where the ranking is computed using the
"decision_function" scores).
In scikit-learn, it is imple
On Wed, Jul 23, 2014 at 4:47 AM, Peter Prettenhofer <
peter.prettenho...@gmail.com> wrote:
>
> An alternative is to use a GradientBoostingRegressor with quantile loss to
> generate prediction intervals (see [1]) -- only for the keen - i've once
> used that unsuccessfully in a Kaggle comp. Its not
from sklearn.multiclass import OneVsRestClassifier
clf = OneVsRestClassifier(ElasticNet())
should work.
This is tested here:
https://github.com/scikit-learn/scikit-learn/blob/master/sklearn/tests/test_multiclass.py#L168
For setting the parameters by grid-search, you need to use the
"estimator__
s to start with?
>
> Thanks
> --
> Sheila
>
> On 8 July 2014 17:02, Mathieu Blondel wrote:
>
>>
>>
>>
>> On Tue, Jul 8, 2014 at 11:27 PM, Sheila the angel > > wrote:
>>
>>> First I scaled the complete data-set and then splitting it
On Tue, Jul 8, 2014 at 11:27 PM, Sheila the angel
wrote:
> First I scaled the complete data-set and then splitting it in test and
> train data.
>
You should not pre-process the data before splitting it. Just ask yourself
how you would use your model in practice. In a real-world setting, you
woul
Hi Fernando,
On Sun, Jun 29, 2014 at 1:53 PM, Fernando Paolo wrote:
> Hello,
>
> I must be missing something obvious because I can't find the "actual"
> coefficients of the polynomial fitted using LassoCV. That is, for a 3rd
> degree polynomial
>
> p = a0 + a1 * x + a2 * x^2 + a3 * x^3
>
> I w
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