Hello TPP-Team,
I would like to compile a mzXML file from a Thermo raw-file, which has an
internal structure that cannot be converted by msconvert.
I am able to read out the raw-file and process it, but now want to save it
as a mzXML.
Therefore, without reinventing the wheel, I would like to
The best thing would be to just use your new reader code to extend
msconvert so that it *does* read your file. Then you can output to
anything msconvert already handles.
- Brian Pratt
On Wed, Aug 8, 2012 at 8:40 AM, wlstraube stra...@imp.ac.at wrote:
Hello TPP-Team,
I would like to compile a
Dear Brian,
Thank you very much for the quick response.
If I get you right, I should take the msconvert source code and implement
our code. This sounds logically, but for a first try I would try to keep it
simple.
I would need only the part which writes down the required parameters. Would
For simplicity, you would probably want to go with the hacking up the
old readw code. But if you have any plans for sharing your work or
using it very far into the future then you're better off with
ProteoWizard and msconvert since that gets maintained and offers more
output formats.
Brian
On
