Dear Brian,

Thank you very much for the quick response.

If I get you right, I should take the msconvert source code and implement 
our code. This sounds logically, but for a first try I would try to keep it 
simple.

I would need only the part which writes down the required parameters. Would 
you be able (and kind) to provide me with that part?

Another option would be the old 
ReAdW<http://tools.proteomecenter.org/wiki/index.php?title=Software:ReAdW>converter
 source code. Any idea which file I would have to choose ? 

( 
http://sashimi.svn.sourceforge.net/viewvc/sashimi/branches/readw_3_0/mzXML/converters/ReAdW/
 
)


With best regards,

Werner






. 

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