Thanks Kristian.
I think you have summed up the situation well. I did use Tandem ETD in
previous just like you told, but CYCLONE release of X!Tandem says it has
incorporated rules found by pFind group. So, if I have to use it like the
way I did earlier, I am just curious how do they implement
The latest ProteinProspector performs as well as pfind if used properly. See
the 2011 abrf iprg study on etd analysis. Does pfind write pepxml?
-Matt
On Jul 26, 2011 2:00 AM, Amit Yadav amit007thech...@gmail.com wrote:
Thanks Kristian.
I think you have summed up the situation well. I did use
