Hi David,
The patch works beautifully. Thanks for the fix.
Scott
On Wed, Aug 5, 2009 at 9:24 AM, David Shteynberg <
dshteynb...@systemsbiology.org> wrote:
> Hi Scott,
>
> I just checked in a fix to this error in SVN. The problem was the spectrum
> names were getting extra whitespace at the end
Hi Scott,
I just checked in a fix to this error in SVN. The problem was the spectrum
names were getting extra whitespace at the end in the .tandem files, which
were being propagated to the pepXML. The workaround that I committed trims
any extra whitespace surrounding the spectrum name. The fix
Hi Scott,
Thanks for your feedback and I'm glad David is taking a look. I just
want to remind everyone that svn trunk (which you're working with) is
development code. If you want stable results stick with the official
releases.
-Natalie
On Tue, Jul 28, 2009 at 6:35 PM, Scott
Stansfield wrote
Hello Scott,
It sounds like the model PeptideProphet generates with the SVN version
of the TPP fails the model quality controls on your data. I cannot
be sure of the reason without seeing the data. Please post the file
to our FTP site, instructions here:
http://tools.proteomecenter.org/wiki/i
