Re: How to load RDF dump

2017-04-01 Thread Stian Soiland-Reyes
You can either use jena distribution's tdbloader script into the folder "db" (but stop fuseki first), or if the nt file is small enough (e.g. 50 MB) then you can also upload it in the browser interface (but make sure you run fuseki 2 for this). If you run Linux and "dB" is blank, then tdbloader2

Re: Tools for browsing and editing RDF data

2016-11-08 Thread Stian Soiland-Reyes
>>> e-mail: mikael.peso...@lingsoft.fi >>> Tel. +358 2 279 3300 >>> >>> Time zone: GMT+2 >>> >>> Helsinki Office >>> Eteläranta 10 >>> FI-00130 Helsinki >>> FINLAND >>> >>> Turku Office >>> Linnankatu 10 A >>> FI-20100 Turku >>> FINLAND >>> > > -- > www.lingsoft.fi > > Speech Applications - Language Management - Translation - Reader's and > Writer's Tools - Text Tools - E-books and M-books > > Mikael Pesonen > System Engineer > > e-mail: mikael.peso...@lingsoft.fi > Tel. +358 2 279 3300 > > Time zone: GMT+2 > > Helsinki Office > Eteläranta 10 > FI-00130 Helsinki > FINLAND > > Turku Office > Linnankatu 10 A > FI-20100 Turku > FINLAND > -- Stian Soiland-Reyes http://orcid.org/-0001-9842-9718

Re: Construct query

2016-09-30 Thread Stian Soiland-Reyes
Important to notice is that the CONSTRUCTed triples are just returned to the caller, they are not added to the graph. It can be useful to reshape RDF, e.g. swap properties or simplify relationships. On 30 Sep 2016 10:32 a.m., "Lorenz B." wrote: > SPARQL

Re: Web UI of Fuseki doesn't start

2016-07-25 Thread Stian Soiland-Reyes
> >>> java -jar /var/www/fuseki/fuseki-server.jar --update --mem /ds >>> >>> as usual. Any other time it worked. >>> >>> I haven't tried Fuseki 2.4.0 so far. >>> >>> Best Regards, >>> >>> Sandor >>

Re: Web UI of Fuseki doesn't start

2016-07-21 Thread Stian Soiland-Reyes
t; Best Regards, > Sandor > > -- > Sandor Kopacsi > Vienna University Computer Center > -- Stian Soiland-Reyes Apache Taverna (incubating), Apache Commons http://orcid.org/-0001-9842-9718

Re: Forward/backward rules (and reasoner memory leaks)

2016-06-24 Thread Stian Soiland-Reyes
>> <http://graphity.org/gp#Template>), noValue(?subClass >>> <http://graphity.org/gc#defaultMode>) -> (?subClass >>> <http://graphity.org/gc#defaultMode> ?o) ] >>> [gcsm: (?template rdf:type <http://graphity.org/gp#Template>), >>> (?template <http://graphity.org/gc#supportedMode> ?supportedMode), >>> (?subClass rdfs:subClassOf ?template), (?subClass rdf:type >>> <http://graphity.org/gp#Template>) -> (?subClass >>> <http://graphity.org/gc#supportedMode> ?supportedMode) ] >> >> >> These two are more reasonable and could be used backwards or hybrid. >> >>> [rdfs9: (?x rdfs:subClassOf ?y), (?a rdf:type ?x) -> (?a rdf:type ?y)] >> >> >> That would work backwards. Depending on the scale of your data you might >> want to table rdf:type for performance/space tradeoff. >> >>> Can these be rewritten as backward rules instead? >> >> >> Sure, the challenge is performance tuning as noted above. >> >> > Does it involve code changes, such as calling reset() etc? >> >> Shouldn't do. >> >> Dave > > -- Stian Soiland-Reyes Apache Taverna (incubating), Apache Commons http://orcid.org/-0001-9842-9718

Re: Modularize Jena code

2016-06-23 Thread Stian Soiland-Reyes
alentityidentifier.info/lei/lookup/ > <http://legalentityidentifier.info/lei/lookup/> > > Join our Data Lakes group on LinkedIn > https://www.linkedin.com/grp/home?gid=8267275 -- Stian Soiland-Reyes Apache Taverna (incubating), Apache Commons http://orcid.org/-0001-9842-9718

Re: Jena rules in owl ontology

2016-06-08 Thread Stian Soiland-Reyes
rules yet. > > thanks -- Stian Soiland-Reyes Apache Taverna (incubating), Apache Commons http://orcid.org/-0001-9842-9718

Re: Fuseki null pointer exception with minimum data

2016-05-22 Thread Stian Soiland-Reyes
gt; org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141) >> at >> org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:119) >> at org.eclipse.jetty.server.Server.handle(Server.java:517) >> at org.eclipse.jetty.serv

Re: Fuseki NullPointerException on 16 million triple dataset

2016-05-22 Thread Stian Soiland-Reyes
ter(ProxiedFilterChain.java:66) >>>> >>>> at >>> >>> >>> org.apache.shiro.web.servlet.AbstractShiroFilter.executeChain(AbstractShiroFilter.java:449) >>>> >>>> at >>> >>> >>> org.apache.shiro.web.servlet.AbstractShiroFilter$1.call(AbstractShiroFilter.java:365) >>>> >>>> at >>> >>> >>> org.apache.shiro.subject.support.SubjectCallable.doCall(SubjectCallable.java:90) >>>> >>>> at >>> >>> >>> org.apache.shiro.subject.support.SubjectCallable.call(SubjectCallable.java:83) >>>> >>>> at >>> >>> >>> org.apache.shiro.subject.support.DelegatingSubject.execute(DelegatingSubject.java:383) >>>> >>>> at >>> >>> >>> org.apache.shiro.web.servlet.AbstractShiroFilter.doFilterInternal(AbstractShiroFilter.java:362) >>>> >>>> at >>> >>> >>> org.apache.shiro.web.servlet.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:125) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1669) >>>> >>>> at >>> >>> >>> org.apache.jena.fuseki.servlets.CrossOriginFilter.handle(CrossOriginFilter.java:285) >>>> >>>> at >>> >>> >>> org.apache.jena.fuseki.servlets.CrossOriginFilter.doFilter(CrossOriginFilter.java:248) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1669) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:581) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:548) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:226) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1156) >>>> >>>> at >>> >>> org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:511) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:185) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1088) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:119) >>>> >>>> at org.eclipse.jetty.server.Server.handle(Server.java:517) >>>> at >>>> org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:306) >>>> at >>> >>> >>> org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:242) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:245) >>>> >>>> at >>>> org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:95) >>>> at >>> >>> >>> org.eclipse.jetty.io.SelectChannelEndPoint$2.run(SelectChannelEndPoint.java:75) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.produceAndRun(ExecuteProduceConsume.java:213) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.run(ExecuteProduceConsume.java:147) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:654) >>>> >>>> at >>> >>> >>> org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(QueuedThreadPool.java:572) >>>> >>>> at java.lang.Thread.run(Thread.java:745) >>>> [2016-05-16 16:43:46] Fuseki INFO [7] 500 Server Error (1.012 s) >>>> >>>> >>>> Could you help please ? >>>> >>> > -- > Lorenz Bühmann > AKSW group, University of Leipzig > Group: http://aksw.org - semantic web research center > -- Stian Soiland-Reyes Apache Commons, Apache Taverna (incubating), Apache Commons RDF (incubating) http://orcid.org/-0001-9842-9718

Re: Performance Cost of Reification

2015-10-11 Thread Stian Soiland-Reyes
Well described. If something requires reification, it usually means either your model is off track (not expanding the right concepts), or your graph scope is wrong (because you want to say who said that, add confidence values , etc). In designing PROV-O we ran into this same issue, and added

Re: Views on Fuseki Docker image?

2015-09-20 Thread Stian Soiland-Reyes
vagrant/alpine. > > Rurik > > > > On Sun, Sep 13, 2015 at 6:00 AM, Stian Soiland-Reyes <st...@apache.org> > wrote: > >> Hi, >> >> There is currently a thread on dev@jena about considering having an >> official Jena Fuseki docker image. >> >

Views on Fuseki Docker image?

2015-09-12 Thread Stian Soiland-Reyes
for command line usage. -- Stian Soiland-Reyes Apache Taverna (incubating), Apache Commons RDF (incubating) http://orcid.org/-0001-9842-9718

Fwd: RDF parser interface for Commons RDF

2015-09-02 Thread Stian Soiland-Reyes
is stored in any Commons RDF implementation - currently tested with the in-memory "simple" implementation. See below: -- Forwarded message ------ From: Stian Soiland-Reyes <st...@apache.org> Date: 3 September 2015 at 02:07 Subject: RDF parser interface for Common

Re: Help on FROM keyword

2015-05-14 Thread Stian Soiland-Reyes
BTW, for arbitrary dummy or example graphs it might be better to name them using example.com and friends (.org, .net) which are exactly for that purpose. E.g. SELECT ?s WHERE { GRAPH http://example.com/graph1 { ?s ?p ?o . } That way it is more obvious to future readers of your code (e.g. your

Re: TDB and Google App Engine

2015-04-12 Thread Stian Soiland-Reyes
I can only think of perhaps an in-memory layer and something clever with the transaction log.. It would add a 700 MB load to the startup time though. But how would you even get this transaction log distributed with the App Engine? For me going down SDB route sounds like a much easier plumbing

Re: Fuseki User Interface unmanageable

2015-04-08 Thread Stian Soiland-Reyes
] Query = SELECT * {?s ?p ?o} limit 5 [2015-04-05 19:40:38] Fuseki INFO [1] exec/select [2015-04-05 19:40:38] Fuseki INFO [1] 200 OK (86 ms) -- Stian Soiland-Reyes Apache Taverna (incubating), Apache Commons RDF (incubating) http://orcid.org/-0001-9842-9718

Re: building ontology

2015-04-08 Thread Stian Soiland-Reyes
??? -- Stian Soiland-Reyes Apache Taverna (incubating), Apache Commons RDF (incubating) http://orcid.org/-0001-9842-9718

Re: Query regarding Jena versions

2015-04-03 Thread Stian Soiland-Reyes
We generally recommend using the latest Jena, which now is 2.13.0. See http://jena.apache.org/download/ Is there any particular reason why you are considering using 2.6.4? On 3 Apr 2015 17:10, Rose Beck rosebeck...@gmail.com wrote: I downloaded Jena 2.6.4 today but I was not able to load

Re: Apache Jena for Android

2015-04-02 Thread Stian Soiland-Reyes
SDK. I will try to get it working. A dependency on Android specific code would probably make mainline integration more difficult though. Sören -- Stian Soiland-Reyes Apache Taverna (incubating), Apache Commons RDF (incubating) http://orcid.org/-0001-9842-9718

Re: fuseki.war fails to start: Unsupported major.minor version 51.0

2015-04-01 Thread Stian Soiland-Reyes
The JAVA_HOME environment variable is not (and should not) be passed through to a service startup script, as it would not work on reboot. Instead you have to modify something like /etc/default/tomcat or run updates-alternatives -config java to change the default java OS-wide. In some

Re: fuseki.war fails to start: Unsupported major.minor version 51.0

2015-04-01 Thread Stian Soiland-Reyes
schrieb Stian Soiland-Reyes: The JAVA_HOME environment variable is not (and should not) be passed through to a service startup script, as it would not work on reboot. Instead you have to modify something like /etc/default/tomcat or run updates-alternatives -config java to change the default java OS

Re: Apache Jena for Android

2015-04-01 Thread Stian Soiland-Reyes
-- I like: Like Like - The likeliest place on the web http://like-like.xenei.com LinkedIn: http://www.linkedin.com/in/claudewarren -- Stian Soiland-Reyes Apache Taverna (incubating), Apache Commons RDF (incubating) http://orcid.org/-0001-9842-9718

Re: Preprocessor or formatting data in fuseki

2015-03-31 Thread Stian Soiland-Reyes
is done. Andy -- Stian Soiland-Reyes Apache Taverna (incubating), Apache Commons RDF (incubating) http://orcid.org/-0001-9842-9718

Re: Apache Jena for Android

2015-03-12 Thread Stian Soiland-Reyes
to access every triple but not all at a time ... Thank you in advance Regards Fabio -- Stian Soiland-Reyes Apache Taverna (incubating), Apache Commons RDF (incubating) http://orcid.org/-0001-9842-9718

Re: Print a model without the option ^^http://www.w3.org/2001/XMLSchema#string

2015-03-02 Thread Stian Soiland-Reyes
. greetings. -- Stian Soiland-Reyes Apache Taverna (incubating) http://orcid.org/-0001-9842-9718

Re: Strange Exception

2015-02-16 Thread Stian Soiland-Reyes
++ E-Mail bru...@netestate.de ++ http://www.netestate.de/ ++ ++ Sitz: München, HRB Nr.142452 (Handelsregister B München) ++ USt-IdNr. DE221033342 ++ Geschäftsführer: Michael Brunnbauer, Franz Brunnbauer ++ Prokurist: Dipl. Kfm. (Univ.) Markus Hendel -- Stian Soiland-Reyes

Re: hot swap tdb behind fuseki

2015-02-10 Thread Stian Soiland-Reyes
, which would allow staged restarts. But before I go there I thought I would ask if there is an easier way. Does anyone have a usage pattern for this, or can point me to some documentation or classes that would get me started? Thanks, --Paul -- Stian Soiland-Reyes Apache Taverna

Re: hot swap tdb behind fuseki

2015-02-10 Thread Stian Soiland-Reyes
Tyson phty...@sbcglobal.net wrote: On Tue, 2015-02-10 at 23:38 +, Stian Soiland-Reyes wrote: Are you using the tdb to swap just for reading, or would you need to synchronize transactions? Below I'll assume you mean 'reading', and that you want to swap because you have a 'newer' tdb

Re: Sparql Resultset

2015-02-06 Thread Stian Soiland-Reyes
Or use CONSTRUCT WHERE {} shorthand: http://www.w3.org/TR/sparql11-query/#constructWhere I must admit I didn't check if this works in Jena, but given that Andy cowrote the spec... :-) On 6 Feb 2015 09:39, Andy Seaborne a...@apache.org wrote: On 06/02/15 02:32, Kamalraj Jairam wrote: Hello

Re: Sparql Resultset

2015-02-06 Thread Stian Soiland-Reyes
the construct graph would look like On 6 Feb 2015, at 9:58 pm, Andy Seaborne a...@apache.org wrote: On 06/02/15 09:54, Stian Soiland-Reyes wrote: Or use CONSTRUCT WHERE {} shorthand: http://www.w3.org/TR/sparql11-query/#constructWhere I must admit I didn't check if this works in Jena, but given

Re: Jena setup

2015-02-04 Thread Stian Soiland-Reyes
Message- From: Stian Soiland-Reyes [mailto:st...@apache.org] Sent: Tuesday, February 03, 2015 6:01 PM To: joshuaaa...@gmail.com; users@jena.apache.org Subject: Re: Jena setup You would also want to run update-rc.d for the runlevels so that it is started on reboot. I'm afraid I don't

Re: Jena setup

2015-02-04 Thread Stian Soiland-Reyes
:11:20 INFO Dataset path = /ds 12:11:20 INFO Fuseki 1.1.1 2014-10-02T16:36:17+0100 12:11:20 INFO Started 2015/02/04 12:11:20 UTC on port 3030 On 4 February 2015 at 12:01, Stian Soiland-Reyes soiland-re...@cs.manchester.ac.uk wrote: My apologies for confusing you.. Redhat-based distros has

Re: Jena setup

2015-02-03 Thread Stian Soiland-Reyes
You would also want to run update-rc.d for the runlevels so that it is started on reboot. I'm afraid I don't remember the exact syntax. Note that the init script from Jena Fuseki uses /etc/fuseki for both configuration and data storage. You can either edit the init script or create a symlink to

Re: elephas project

2015-01-27 Thread Stian Soiland-Reyes
2015 at 09:57, Carmen Manzulli carmenmanzu...@gmail.com wrote: Hi, I would like to know what version will i insert in my dependecies if i want to prove jena-elephas-*? thanks, Carmen -- Stian Soiland-Reyes Apache Taverna (incubating) http://orcid.org/-0001-9842-9718

Re: shiro.ini with custom realm fuseki2

2015-01-19 Thread Stian Soiland-Reyes
in. /run but I don't see anything different. I restarted tomcat and it isn't recognizing any change I make. I even wiped out the shiro.ini file to see if it would error, nothing happens. On Jan 19, 2015 7:04 AM, Stian Soiland-Reyes soiland-re...@cs.manchester.ac.uk wrote: I actually modified my

Re: shiro.ini with custom realm fuseki2

2015-01-19 Thread Stian Soiland-Reyes
certificateFilter=custom.shiro.web.X509AuthenticationFilter #localhost=org.apache.jena.fuseki.authz.LocalhostFilter Not sure what I am doing wrong. Thanks in advance -- Stian Soiland-Reyes, myGrid team School of Computer Science The University of Manchester http://soiland-reyes.com/stian/work/ http

Re: Third Party Libraries in Fuseki 2

2015-01-16 Thread Stian Soiland-Reyes
libraries in Fuseki2? I am using fuseki.war. I would like to use a custom shiro realm. I am not sure where to place the custom.jar. Thanks -- Stian Soiland-Reyes, myGrid team School of Computer Science The University of Manchester http://soiland-reyes.com/stian/work/ http://orcid.org/-0001

Re: Third Party Libraries in Fuseki 2

2015-01-16 Thread Stian Soiland-Reyes
module. Andy On 16/01/15 13:59, Stian Soiland-Reyes wrote: It should be safest to do the second option of WEB-INF/lib - otherwise you might have to ensure that everything your JAR in tomcat/lib requires is also in tomcat/lib (even if it is in WEB-INF/lib) - which could cause conflicts

Re: Third Party Libraries in Fuseki 2

2015-01-16 Thread Stian Soiland-Reyes
to be a bit trickier, as you have to edit the launcher scripts fuseki-server or fuseki-server.bat to modify the java -classpath. (Even then I could not get this to work, but I didn't try very hard). On 16 January 2015 at 16:14, Stian Soiland-Reyes st...@apache.org wrote: Presumably one would always

Re: Testing of jena-osgi bundle

2015-01-14 Thread Stian Soiland-Reyes
it. Cheers, Reto On Mon, Jan 12, 2015 at 1:42 AM, Stian Soiland-Reyes st...@apache.org wrote: Would anyone who is using OSGi and Jena be able to test the experimental jena-osgi bundle? I might have asked about this earlier, but have since updated the patch. The ZIP at https

Testing of jena-osgi bundle

2015-01-11 Thread Stian Soiland-Reyes
] Jena OSGi bundle (#10) To: apache/jena j...@noreply.github.com Cc: Stian Soiland-Reyes st...@mygrid.org.uk Stian Soiland-Reyes on d...@jena.apache.org replies: So I have updated the jena-osgi pull request in #10 https://github.com/apache/jena/pull/10 As commented there - it now includes a new

Re: Validating and resolving RDF URIs

2015-01-08 Thread Stian Soiland-Reyes
is quite, err, precise. See also the parsing pipeline that uses CheckerIRI for checking. In fact, you might want to use StreamRDF (where all parers send things). Andy Thanks. Martynas -- Stian Soiland-Reyes, myGrid team School of Computer Science The University

Re: Validating and resolving RDF URIs

2015-01-08 Thread Stian Soiland-Reyes
for checking. In fact, you might want to use StreamRDF (where all parers send things). Andy Thanks. Martynas -- Stian Soiland-Reyes, myGrid team School of Computer Science The University of Manchester http://soiland-reyes.com/stian/work/ http://orcid.org/-0001-9842-9718

Re: Using Model inside Java Objects.

2014-11-27 Thread Stian Soiland-Reyes
( )); . DM -- Stian Soiland-Reyes, myGrid team School of Computer Science The University of Manchester http://soiland-reyes.com/stian/work/ http://orcid.org/-0001-9842-9718

Re: Jena / Stanbol success stories?

2014-11-26 Thread Stian Soiland-Reyes
for indexing by NSA PRISM -- Stian Soiland-Reyes Apache Taverna (incubating) http://orcid.org/-0001-9842-9718 Index: trunk/content/about_jena/about.mdtext === --- trunk/content/about_jena/about.mdtext (revision 1641732

Re: Jena / Stanbol success stories?

2014-11-26 Thread Stian Soiland-Reyes
allow third party influence to affect the future of the project for specific outside organisations. So we'd have to be very careful how we phrase things to not fall afoul of this requirement. Rob From: Stian Soiland-Reyes st...@apache.org Reply-To: users@jena.apache.org Date: Wednesday, 26

Re: Jena / Stanbol success stories?

2014-11-26 Thread Stian Soiland-Reyes
/search?q=powered+by+site%3Aapache.org They seem to be fairly simple lists of uses, without (as you say) any implied endorsement or promotion. Damian -- Damian Steer Senior Technical Researcher Research IT +44 (0) 117 928 7057 -- Stian Soiland-Reyes, myGrid team School of Computer Science

Re: ApacheCon EU 2014?

2014-11-07 Thread Stian Soiland-Reyes
...@salzburgresearch.at wrote: +1 for a beer all together the Marmotta folks we'll be in Budapest from Sunday to Thursday On 06/11/14 14:39, Stian Soiland-Reyes wrote: Hi! Is any Jena folks (in addition to Andy Seaborne) planning to attend ApacheCon EU 2014 in two weeks time? http

ApacheCon EU 2014?

2014-11-06 Thread Stian Soiland-Reyes
be interested in going - just looking for funds.. -- Stian Soiland-Reyes, myGrid team School of Computer Science The University of Manchester

Please test: Jena OSGi bundle

2014-10-31 Thread Stian Soiland-Reyes
I have suggested for Jena to add an OSGi bundle jena-osgi - https://github.com/apache/jena/pull/10 I've done it as a single bundle of the major modules (those in the distribution ZIP) - effectively putting them all on the same classloader to avoid any issues with the service registries, as part

Re: [ANN] Jena 2.12.1 released

2014-10-18 Thread Stian Soiland-Reyes
or from Maven central. Rob -- Stian Soiland-Reyes, myGrid team School of Computer Science The University of Manchester http://soiland-reyes.com/stian/work/ http://orcid.org/-0001-9842-9718