Re: [SIESTA-L] error: forrtl: severe (174): SIGSEGV, segmentation fault

Mon, 25 Aug 2014 03:56:23 -0700 

First try and reduce number of cores, one Fe atom with 8 cores is maybe a
bit too much...


2014-08-25 12:36 GMT+02:00 <[email protected]>:

>
>
>   Original Message
>
> Dear Siesta User,
>
> I am trying to run parallel siesta using lam-mpi on 8 nodes.
> I could compile in Obj directory,but on running the program for
> example Fe of the package,i am getting this error.
>
> outcell: Cell vector modules (Ang) : 2.485493 2.485493 2.485493
> outcell: Cell angles (23,13,12) (deg): 109.4712 70.5288 70.5288
> outcell: Cell volume (Ang**3) : 11.8200
> New_DM. Step: 1
> Initializing Density Matrix...
>
> initdm: Initial spin polarization (Qup-Qdown) = 4.000000
>
> InitMesh: MESH = 16 x 16 x 16 = 4096
> InitMesh: Mesh cutoff (required, used) = 150.000 171.794 Ry
>
> * Maximum dynamic memory allocated = 7 MB
> forrtl: severe (174): SIGSEGV, segmentation fault occurred
> Image PC Routine Line
> Source
> siesta 0000000000837F53 Unknown Unknown Unknown
> siesta 00000000007A1945 Unknown Unknown Unknown
> siesta 000000000079E718 Unknown Unknown Unknown
> siesta 00000000004C7FCF Unknown Unknown Unknown
> siesta 0000000000442972 Unknown Unknown Unknown
> siesta 0000000000433DAD Unknown Unknown Unknown
> siesta 00000000004FD92C Unknown Unknown Unknown
> siesta 0000000000521083 Unknown Unknown Unknown
> siesta 00000000005211F7 Unknown Unknown Unknown
> siesta 0000000000407462 Unknown Unknown Unknown
> libc.so.6 000000329181D8A4 Unknown Unknown Unknown
> siesta 00000000004073A9 Unknown Unknown Unknown
> forrtl: severe (174): SIGSEGV, segmentation fault occurred
> Image PC Routine Line
> Source
> siesta 0000000000837F53 Unknown Unknown Unknown
> siesta 00000000007A1945 Unknown Unknown Unknown
> siesta 000000000079E718 Unknown Unknown Unknown
> siesta 00000000004C7FCF Unknown Unknown Unknown
> siesta 0000000000442972 Unknown Unknown Unknown
> siesta 0000000000433DAD Unknown Unknown Unknown
> siesta 00000000004FD92C Unknown Unknown Unknown
> siesta 0000000000521083 Unknown Unknown Unknown
> siesta 00000000005211F7 Unknown Unknown Unknown
> siesta 0000000000407462 Unknown Unknown Unknown
> libc.so.6 000000329181D8A4 Unknown Unknown Unknown
> siesta 00000000004073A9 Unknown Unknown Unknown
> forrtl: severe (174): SIGSEGV, segmentation fault occurred
> Image PC Routine Line
> Source
> siesta 0000000000837F53 Unknown Unknown Unknown
> siesta 00000000007A1945 Unknown Unknown Unknown
> siesta 000000000079E718 Unknown Unknown Unknown
> siesta 00000000004C7FCF Unknown Unknown Unknown
> siesta 0000000000442972 Unknown Unknown Unknown
> siesta 0000000000433DAD Unknown Unknown Unknown
> siesta 00000000004FD92C Unknown Unknown Unknown
> siesta 0000000000521083 Unknown Unknown Unknown
> siesta 00000000005211F7 Unknown Unknown Unknown
> siesta 0000000000407462 Unknown Unknown Unknown
> libc.so.6 000000329181D8A4 Unknown Unknown Unknown
> siesta 00000000004073A9 Unknown Unknown Unknown
> forrtl: severe (174): SIGSEGV, segmentation fault occurred
> Image PC Routine Line
> Source
> siesta 0000000000837F53 Unknown Unknown Unknown
> siesta 00000000007A1945 Unknown Unknown Unknown
> siesta 000000000079E718 Unknown Unknown Unknown
> siesta 00000000004C7FCF Unknown Unknown Unknown
> siesta 0000000000442972 Unknown Unknown Unknown
> siesta 0000000000433DAD Unknown Unknown Unknown
> siesta 00000000004FD92C Unknown Unknown Unknown
> siesta 0000000000521083 Unknown Unknown Unknown
> siesta 00000000005211F7 Unknown Unknown Unknown
> siesta 0000000000407462 Unknown Unknown Unknown
> libc.so.6 000000329181D8A4 Unknown Unknown Unknown
> siesta 00000000004073A9 Unknown Unknown Unknown
> forrtl: severe (174): SIGSEGV, segmentation fault occurred
> Image PC Routine Line
> Source
> siesta 0000000000837F53 Unknown Unknown Unknown
> siesta 00000000007A1945 Unknown Unknown Unknown
> siesta 000000000079E718 Unknown Unknown Unknown
> siesta 00000000004C7FCF Unknown Unknown Unknown
> siesta 0000000000442972 Unknown Unknown Unknown
> siesta 0000000000433DAD Unknown Unknown Unknown
> siesta 00000000004FD92C Unknown Unknown Unknown
> siesta 0000000000521083 Unknown Unknown Unknown
> siesta 00000000005211F7 Unknown Unknown Unknown
> siesta 0000000000407462 Unknown Unknown Unknown
> libc.so.6 000000329181D8A4 Unknown Unknown Unknown
> siesta 00000000004073A9 Unknown Unknown Unknown
> forrtl: severe (174): SIGSEGV, segmentation fault occurred
> Image PC Routine Line
> Source
> siesta 0000000000837F53 Unknown Unknown Unknown
> siesta 00000000007A1945 Unknown Unknown Unknown
> siesta 000000000079E718 Unknown Unknown Unknown
> siesta 00000000004C7FCF Unknown Unknown Unknown
> siesta 0000000000442972 Unknown Unknown Unknown
> siesta 0000000000433DAD Unknown Unknown Unknown
> siesta 00000000004FD92C Unknown Unknown Unknown
> siesta 0000000000521083 Unknown Unknown Unknown
> siesta 00000000005211F7 Unknown Unknown Unknown
> siesta 0000000000407462 Unknown Unknown Unknown
> libc.so.6 000000329181D8A4 Unknown Unknown Unknown
> siesta 00000000004073A9 Unknown Unknown Unknown
> forrtl: severe (174): SIGSEGV, segmentation fault occurred
> Image PC Routine Line
> Source
> siesta 0000000000837F53 Unknown Unknown Unknown
> siesta 00000000007A1945 Unknown Unknown Unknown
> siesta 000000000079E718 Unknown Unknown Unknown
> siesta 00000000004C7FCF Unknown Unknown Unknown
> siesta 0000000000442972 Unknown Unknown Unknown
> siesta 0000000000433DAD Unknown Unknown Unknown
> siesta 00000000004FD92C Unknown Unknown Unknown
> siesta 0000000000521083 Unknown Unknown Unknown
> siesta 00000000005211F7 Unknown Unknown Unknown
> siesta 0000000000407462 Unknown Unknown Unknown
> libc.so.6 000000329181D8A4 Unknown Unknown Unknown
> siesta 00000000004073A9 Unknown Unknown Unknown
> forrtl: severe (174): SIGSEGV, segmentation fault occurred
> Image PC Routine Line
> Source
> siesta 0000000000837F53 Unknown Unknown Unknown
> siesta 00000000007A1945 Unknown Unknown Unknown
> siesta 000000000079E718 Unknown Unknown Unknown
> siesta 00000000004C7FCF Unknown Unknown Unknown
> siesta 0000000000442972 Unknown Unknown Unknown
> siesta 0000000000433DAD Unknown Unknown Unknown
> siesta 00000000004FD92C Unknown Unknown Unknown
> siesta 0000000000521083 Unknown Unknown Unknown
> siesta 00000000005211F7 Unknown Unknown Unknown
> siesta 0000000000407462 Unknown Unknown Unknown
> libc.so.6 000000329181D8A4 Unknown Unknown Unknown
> siesta 00000000004073A9 Unknown Unknown Unknown
>
> -----------------------------------------------------------------------------
> One of the processes started by mpirun has exited with a nonzero exit
> code. This typically indicates that the process finished in error.
> If your process did not finish in error, be sure to include a "return
> 0" or "exit(0)" in your C code before exiting the application.
>
> PID 19071 failed on node n0 (127.0.0.1) with exit status 174.
>
> -----------------------------------------------------------------------------
>
> I attach here the arch.make file.
>
> PLease guide for this error.
>



-- 
Kind regards Nick

Responder a