I have solved it. The prgram mzXML2Search have been installed follow
by TPP installed.
Thank your very much for your kind.

Bright

On 2月17日, 上午2时13分, Matthew Chambers <[email protected]>
wrote:
> It depends what you want to use the MGF for. I think the TPP pipeline
> for the near future should continue using mxXML2Search for MGF output
> because of the way Mascot2XML expects the TITLE line to be formatted. In
> a future msconvert version, scan-number-only files like mzXML or Thermo
> RAW should convert to the DTA-style TITLE format that TPP is used to
> (except I don't think it does the 0-padding). On the other hand, if you
> don't care about using the MGF or its downstream products in the TPP,
> msconvert is easy to use for this purpose.
>
> -Matt
>
>
>
> Brian Pratt wrote:
> > The msconvert tool should handle that:
>
> > To convert foo.mzxml to foo.mgf
>
> > msconvert --mgf foo.mzxml
>
> > -----Original Message-----
> > From: [email protected]
> > [mailto:[email protected]] On Behalf Of Bright
> > Sent: Monday, February 16, 2009 6:20 AM
> > To: spctools-discuss
> > Subject: [spctools-discuss] How to convert mzXML file to mgf file
>
> > Hi everyone
> >    I can't deal with the problem that convert mzXML file to mgf file.
> > Could your give me some ideal to over it.
> >   Thank.

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