Hello Amit, I am working with Waters .raw files. MassLynx is installed on every PC we need for working with data. So, that is not the problem.
On Fri, Apr 23, 2010 at 9:49 AM, Amit Yadav <[email protected]>wrote: > You may be trying it on a system without Thermo XCalibur. So, msconvert > wont work in that case. > For details , u can find the solution on this thread link- > > > http://groups.google.com/group/spctools-discuss/browse_thread/thread/a5aae3bb8a79c20e/c9d36a54ea33a338?lnk=gst&q=msfilereader#c9d36a54ea33a338 > > Regards, > > Amit Kumar Yadav > Senior Research Fellow (SRF-CSIR) > IGIB, New Delhi (India) > > http://masswiz.igib.res.in > > > > > On Fri, Apr 23, 2010 at 12:10 PM, Gradjanin Grada <[email protected]>wrote: > >> Hello, >> I have the same problem: restart does not help, new installation does not >> help. However, after making several attempts I have managed to install TPP >> and I can start it but not a single function works properly: I cannot >> generate mzXML from any raw files (Thermo and Waters) neither can I >> transform xml to any other format (such as pkl or mgf). Here is one output >> example: >> >> >> c:\Inetpub\tpp-bin\massWolf -v --mzXML -z -g >> c:/Inetpub/wwwroot/ISB/data/markustest/MK-091130_A5.raw >> >> >> >> *c:/Inetpub/wwwroot/ISB/data/markustest/MK-091130_A5.mzXML.gz* [ >> Unreadable! ] >> >> c:\Inetpub\tpp-bin\massWolf -v --mzXML -z -g >> c:/Inetpub/wwwroot/ISB/data/markustest/MK-091130_A5.raw >> >> ------------------------------ >> >> Settings: >> centroid scans: 0 >> compress scans: 1 >> verbose mode: 1 >> lockspray: 1 >> MS^E: 0 >> threshold: 0 >> force precursor selection from filter line: 0 >> mzML mode: 0 >> mzXML mode: 1 >> >> >> input filename: c:/Inetpub/wwwroot/ISB/data/markustest/MK-091130_A5.raw >> output filename: >> c:/Inetpub/wwwroot/ISB/data/markustest/MK-091130_A5.mzXML.gz >> output file as gzip: 1 >> >> *Command FAILED* >> >> >> >> Running from the command line also did not work. >> The strange thing is that this also did not work on anoother PC with a >> 32-bit WinXP! Only after re-installing WinXP, it did perform OK in botzh >> operating modes: browser and command line. >> >> >> >> On Thu, Apr 22, 2010 at 6:31 PM, Natalie Tasman < >> [email protected]> wrote: >> >>> Jacques, >>> >>> I'm wondering if 64-bit perl installs to C:\Perl64 or something similar, >>> rather than the expeted C:\Perl. Can you please check? >>> >>> Thanks, >>> >>> Natalie >>> >>> >>> >>> On 4/22/10 3:08 AM, Jacques wrote: >>> >>>> Hi everyone >>>> I'm trying to install TPP (TPP_Setup_v4_3_JETSTREAM_rev_1.exe) on an >>>> x64 Windows 2003 R3 Terminal Server. >>>> Both ActiveState Perl and Perl64 (ActivePerl-5.8.9.827-MSWin32- >>>> x86-291969.msi& ActivePerl-5.8.9.827-MSWin32-x64-291969.msi) are >>>> installed on the system and Paths are OK. >>>> At the end of the TPP setup, the installation script has problems >>>> location Perl: >>>> I have the the impression the which.exe is somehow buggy... >>>> >>>> Here the message I get during setup at the cms prompt: >>>> ======= >>>> a quick check to see if the TPP installation process went OK: >>>> checking path... should include "c:\perl\bin;C:\Inetpub\tpp-bin;" >>>> OK >>>> --- >>>> checking perl... should say perl\bin\perl.exe >>>> --- >>>> perl install looks bad - where is c:\perl\bin\perl.exe? >>>> try a reboot >>>> Press any key to continue . . . >>>> >>>> ===== >>>> >>>> >>>> >>>> Any idea what i'm doing wrong? >>>> Thanks a lot for any help >>>> Jacques >>>> >>>> >>>> >>> >>> -- >>> You received this message because you are subscribed to the Google Groups >>> "spctools-discuss" group. >>> To post to this group, send email to [email protected]. >>> To unsubscribe from this group, send email to >>> [email protected]<spctools-discuss%[email protected]> >>> . >>> For more options, visit this group at >>> http://groups.google.com/group/spctools-discuss?hl=en. >>> >>> >> >> >> -- >> građanin >> >> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To post to this group, send email to [email protected]. >> To unsubscribe from this group, send email to >> [email protected]<spctools-discuss%[email protected]> >> . >> For more options, visit this group at >> http://groups.google.com/group/spctools-discuss?hl=en. >> > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]<spctools-discuss%[email protected]> > . > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > -- građanin -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
