Hi,

I am using PeptideSeive for a subset of peptides to check for their
proteotypic nature. I downloaded the GUI from
http://tools.proteomecenter.org/wiki/index.php?title=Software:PeptideSieve.
The following parameters were selected:
Experimental Design : PAGE_ESI
Allowed Mis-cleavage :1
Threshold Score : 0

My search input was:
RFADFTVYRN
KTSSLDPNDQVAMGRQ
RVIVFDGVPSKN

And following was the output:

RFADFTVYRN              0.929997
RFADFTVYRN*             0.0418203
KTSSLDPNDQVAMGRQ        0.773824
KTSSLDPNDQVAMGRQ*       0.154331
RVIVFDGVPSKN            0.944634
RVIVFDGVPSKN*           0.0906222

I am confused as to which score needs to be considered and what does
the asterisk(*) symbol denote?

Can you please clarify?

Thanks,
Sneha

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