You might be dealing Agilent ChemStation .d files rather than Agilent
MassHunter .d files.  Confusing, no?  Check out the ProteoWizard support
group, which I'm forwarding this email to as well.

-Natalie


On Tue, Jul 20, 2010 at 9:23 AM, Karina Chmielewski <
[email protected]> wrote:

>  Meant, Natalie not Nicole. J apologies.
>
>
>
> *From:* [email protected] [mailto:
> [email protected]] *On Behalf Of *Natalie Tasman
> *Sent:* Friday, July 16, 2010 5:52 PM
> *To:* [email protected]
> *Subject:* Re: [spctools-discuss] Error converting .d to mzxml
>
>
>
> (Apologies for the typo-- it's the TPP *trapper* program that's not
> maintained, not Agilent's MassHunter.)
>
> On Fri, Jul 16, 2010 at 2:51 PM, Natalie Tasman <
> [email protected]> wrote:
>
> Some simple advice: try the most recent version of msconvert from the
> ProteoWizard project (an older version is included with the current TPP
> release, but bugs may have been fixed since then).
>
>
>
> MassHunter is no longer actively maintained and will likely be retired in
> the upcoming TPP release.
>
>
>
> -Natalie
>
>
>
> On Fri, Jul 16, 2010 at 1:14 PM, Karina <[email protected]>
> wrote:
>
> Hello,
>
> We are having intermittent (but reproducible) problems with the
> trapper tool.  Usually 1-2 in 100 samples fail conversion from .d to
> mzxml.   Our .D data folders are generated with a Agilent Q-TOF
> system, MassHunter Acquisition vB.02.01.  Trapper version is 3.1.
> OS : Win XP SP 3.  The error we are getting is the following:
>
> C:\Program Files\trapper\trapper_bad>"C:\Program Files\trapper
> \trapper.exe" --mz
> XML --verbose 16026.d
> Settings:
>  centroid scans: 0
>  compress scans: 0
>  verbose mode: 1
>  skip checksum: 0
>  deisotope:0
>  requirePeptideLikeAbundanceProfile: 0
>  relativeTolerance: 0
>  absoluteTolerance: 0
>  limitChargeState:0
>  maxChargeState: 0
>  mzML mode: 0
>  mzXML mode: 1
>  input filename: 16026.d
>  output filename: 16026.mzXML
>
> ERROR at .\MHDACWrapper.cpp, 60:
> HR = -2146232832
> OpenDataFile
> unable to open 16026.d with MassHunter interface
>
> any advice?
>
> Thank you,
> Karina Chmielewski
>
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