Hi Bingyun, What is the full command (and output) that you are using to run ProteinProphet? Make sure you are not using the NOCOVERAGE option, as this disables said calculation. Cheers, --Luis
On Wed, Jul 21, 2010 at 11:55 AM, Bingyun <[email protected]> wrote: > Hi, I am seeking help on using proteinPorphet command alone. I always > used it appended to xinteract -Op, but I met some problem when I used > this command alone. The problem is I cannot display the percentage > coverage of proteins. There seems no options to show it. Another issue > is the proteinlength option seemed broken. No matter whether I chose > it or not, it always shows "0". > > Thank you for help. > > Bingyun > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
