Right on! Thanks, Joe On Nov 12, 4:16 pm, Joe Slagel <[email protected]> wrote: > According to the proteowizard page is does: > > http://proteowizard.sourceforge.net/technical/formats/index.html > > > > On Fri, Nov 12, 2010 at 4:03 PM, Samuel_E <[email protected]> wrote: > > Joe, > > This is great news, thanks! I noticed that Waters .raw files are not > > mentioned on the msconvert web page (http://tools.proteomecenter.org/ > > wiki/index.php?title=Msconvert_Capabilities<http://tools.proteomecenter.org/%0Awiki/index.php?title=Msconvert_Cap...>). > > It does work with > > MassLynx .raw files, right? > > > Thanks, > > Sam > > > On Nov 12, 2:14 pm, Joe Slagel <[email protected]> wrote: > > > Samuel, > > > > The best solution might be to use msconvert instead of MassWolf. You > > should > > > then be able to simply wildcard all of your raw files e.g. msconvert > > --mzXML > > > *.raw > > > > If you do this you'll also be using the latest supported conversion tool > > -- > > > as massWolf is no longer supported. > > > > -Joe > > > > On Fri, Nov 12, 2010 at 11:33 AM, Samuel_E <[email protected]> > > wrote: > > > > I seem to be unable to process the conversion of .raw files to .mzXML > > > > with massWolf for a folder of .raw files. The syntax I'm using is: > > > > > for %%f in (path\*.raw) do MassWolf --mzXML path\*.raw %f > > > > > massWolf works OK for single files with the command: > > > > > massWolf --mzXML path\filename.raw > > > > > How to convert in batch? Help! > > > > > Thanks > > > > Samuel_E > > > > > -- > > > > You received this message because you are subscribed to the Google > > Groups > > > > "spctools-discuss" group. > > > > To post to this group, send email to [email protected] > > . > > > > To unsubscribe from this group, send email to > > > > [email protected]<spctools-discuss%[email protected]> > > <spctools-discuss%[email protected]<spctools-discuss%[email protected]> > > > > > . > > > > For more options, visit this group at > > > >http://groups.google.com/group/spctools-discuss?hl=en. > > > > -- > > > Joe Slagel > > > Institute for Systems Biology > > > [email protected] > > > (206) 732-1362 > > > -- > > You received this message because you are subscribed to the Google Groups > > "spctools-discuss" group. > > To post to this group, send email to [email protected]. > > To unsubscribe from this group, send email to > > [email protected]<spctools-discuss%[email protected]> > > . > > For more options, visit this group at > >http://groups.google.com/group/spctools-discuss?hl=en. > > -- > Joe Slagel > Institute for Systems Biology > [email protected] > (206) 732-1362
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