spctools-discuss
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2015/01/12
Re: [spctools-discuss] TPP 4.8.0 compile fatal error
Joseph Slagel
2015/01/12
Re: [spctools-discuss] TPP 4.8.0 compile fatal error
Brian Hampton
2015/01/12
Re: [spctools-discuss] TPP 4.8.0 compile fatal error
Joseph Slagel
2015/01/12
[spctools-discuss] TPP 4.8.0 compile fatal error
Brian Hampton
2015/01/06
Re: [spctools-discuss] How-To get Petunia TPP working with a network share as data directory
Rebekah Dawson
2015/01/05
[spctools-discuss] How-To get Petunia TPP working with a network share as data directory
Ulrich Omasits
2015/01/02
Re: [spctools-discuss] X! TANDEM error
David Shteynberg
2015/01/01
Re: [spctools-discuss] X! TANDEM error
Norbert Mehlmer
2014/12/17
Re: [spctools-discuss] PTM prophet and DiMethylation
David Shteynberg
2014/12/17
Re: [spctools-discuss] Call for Participants: Proteome Informatics Research Group Community Study on Label-free Quantitative Proteomics
Silvia Rocchiccioli
2014/12/16
Re: [spctools-discuss] PTM prophet and DiMethylation
Jesse
2014/12/16
Re: [spctools-discuss] PTM prophet and DiMethylation
David Shteynberg
2014/12/16
Re: [spctools-discuss] PTM prophet and DiMethylation
Jesse
2014/12/15
Re: [spctools-discuss] PTM prophet and DiMethylation
David Shteynberg
2014/12/15
Re: [spctools-discuss] PTM prophet and DiMethylation
Jesse
2014/12/12
Re: [spctools-discuss] Command FAILED RETURN CODE:256
lei
2014/12/10
Re: [spctools-discuss] Command FAILED RETURN CODE:256
Joseph Slagel
2014/12/09
Re: [spctools-discuss] RTCalc (ANN)
Chih-Chiang Tsou
2014/12/09
Re: [spctools-discuss] RTCalc (ANN)
magnus.palmb...@gmail.com
2014/12/08
Re: [spctools-discuss] RTCalc (ANN)
David Shteynberg
2014/12/08
[spctools-discuss] Command FAILED RETURN CODE:256
lei
2014/12/08
Re: [spctools-discuss] xcorr (sequest) and charge filtering for pep.xml files
andreas . otto
2014/12/06
Re: [spctools-discuss] RTCalc (ANN)
Chih-Chiang Tsou
2014/12/05
Re: [spctools-discuss] TPP 4.8 (Windows) tandem output path not correct?
Brian Hampton
2014/12/05
Re: [spctools-discuss] xcorr (sequest) and charge filtering for pep.xml files
David Shteynberg
2014/12/05
Re: [spctools-discuss] RTCalc (ANN)
David Shteynberg
2014/12/05
Re: [spctools-discuss] RTCalc (ANN)
Chih-Chiang Tsou
2014/12/05
[spctools-discuss] xcorr (sequest) and charge filtering for pep.xml files
andreas . otto
2014/12/04
Re: [spctools-discuss] TPP 4.8 msconvert error
Luis Mendoza
2014/12/04
Re: [spctools-discuss] TPP 4.8 (Windows) tandem output path not correct?
David Shteynberg
2014/12/04
[spctools-discuss] TPP 4.8 (Windows) tandem output path not correct?
Brian Hampton
2014/12/04
Re: [spctools-discuss] Problem in TPP 4.7.1 error output from Peptide Prophet
Brian Hampton
2014/12/04
[spctools-discuss] TPP 4.8 msconvert error
Brian Hampton
2014/12/04
Re: [spctools-discuss] Problem in TPP 4.7.1 error output from Peptide Prophet
David Shteynberg
2014/12/04
[spctools-discuss] Problem in TPP 4.7.1 error output from Peptide Prophet
Brian Hampton
2014/12/02
Re: [spctools-discuss] Re: TPP 4.7.1 ASAPratio taking hours Qexactive data (Win7 64 bits 8GB RAM)
David Shteynberg
2014/12/02
Re: [spctools-discuss] Re: TPP 4.7.1 ASAPratio taking hours Qexactive data (Win7 64 bits 8GB RAM)
Hannes Röst
2014/12/02
[spctools-discuss] Xtandem Fasta_pro executable fails handling big Fasta entries
Canan Has
2014/12/01
Re: [spctools-discuss] Re: TPP 4.7.1 ASAPratio taking hours Qexactive data (Win7 64 bits 8GB RAM)
Alejandro
2014/12/01
Re: [spctools-discuss] Re: TPP 4.7.1 ASAPratio taking hours Qexactive data (Win7 64 bits 8GB RAM)
Brian Hampton
2014/12/01
Re: [spctools-discuss] question on PeptideProphet model-quality checks & problem with forced models
David Shteynberg
2014/12/01
[spctools-discuss] Re: TPP 4.7.1 ASAPratio taking hours Qexactive data (Win7 64 bits 8GB RAM)
Alejandro
2014/11/28
RE: [spctools-discuss] spectraST error
Eric Deutsch
2014/11/28
[spctools-discuss] PTMProphet error
钟传奇
2014/11/27
Re: [spctools-discuss] TPP 4.8 How to view and export Xpress results with new ProtXML viewer
Luis Mendoza
2014/11/27
[spctools-discuss] TPP 4.8 How to view and export Xpress results with new ProtXML viewer
Alejandro
2014/11/27
[spctools-discuss] Re: TPP 4.8.0 Release is now available
Alejandro
2014/11/26
Re: [spctools-discuss] spectraST error
delphine wood
2014/11/25
[spctools-discuss] Xcorr filtering of pep.xml
bert heinz
2014/11/21
[spctools-discuss] TPP 4.8.0 Release is now available
Joseph Slagel
2014/11/20
Re: [spctools-discuss] Unable to explain peptide weights in Protein Prophet
Luis Mendoza
2014/11/20
RE: [spctools-discuss] spectraST error
Eric Deutsch
2014/11/20
Re: [spctools-discuss] spectraST error
David Shteynberg
2014/11/20
Re: [spctools-discuss] spectraST error
delphine wood
2014/11/20
Re: [spctools-discuss] spectraST error
Rene B
2014/11/20
Re: [spctools-discuss] spectraST error
delphine wood
2014/11/19
[spctools-discuss] TPP 4.7.1 ASAPratio taking hours Qexactive data (Win7 64 bits 8GB RAM)
Alejandro
2014/11/18
Re: [spctools-discuss] spectraST error
David Shteynberg
2014/11/18
[spctools-discuss] spectraST error
Delphine
2014/11/18
[spctools-discuss] Re: MaRiMba fail with 18 protein mix file
Victor Manuel Solis Mezarino
2014/11/18
[spctools-discuss] Re: Problem with MARIMBA, see ERROR messages below.
Victor Manuel Solis Mezarino
2014/11/17
[spctools-discuss] Unable to explain peptide weights in Protein Prophet
Ira Cooke
2014/11/16
Re: [spctools-discuss] Error writing run
Javier Sotillo Gallego
2014/11/12
Re: [spctools-discuss] Error writing run
Joseph Slagel
2014/11/12
[spctools-discuss] Error writing run
Javier Sotillo Gallego
2014/11/07
Re: [spctools-discuss] translateDNA2AA-FASTA
Luis Mendoza
2014/11/04
Re: [spctools-discuss] FWD: Deprecated CGI endform in tpp_gui.pl caused centos install to fail
Luis Mendoza
2014/10/30
Re: [spctools-discuss] translateDNA2AA-FASTA
Veronica Mutchler
2014/10/30
Re: [spctools-discuss] translateDNA2AA-FASTA
Jimmy Eng
2014/10/30
Re: [spctools-discuss] translateDNA2AA-FASTA
Veronica Mutchler
2014/10/27
Re: [spctools-discuss] MAYU on peptideprophet and iprophet results
David Shteynberg
2014/10/27
Re: [spctools-discuss] translateDNA2AA-FASTA
Veronica Mutchler
2014/10/27
[spctools-discuss] MAYU on peptideprophet and iprophet results
Huoming Zhang
2014/10/24
Re: [spctools-discuss] Re: parsing error for pepXML from mascot result
Etienne Caron
2014/10/24
Re: [spctools-discuss] translateDNA2AA-FASTA
Jimmy Eng
2014/10/24
[spctools-discuss] translateDNA2AA-FASTA
veronica . t . mutchler
2014/10/24
[spctools-discuss] ASAPRatio on unlabeled samples?
veronica . t . mutchler
2014/10/24
Re: [spctools-discuss] Re: parsing error for pepXML from mascot result
David Shteynberg
2014/10/24
Re: [spctools-discuss] Re: parsing error for pepXML from mascot result
Etienne Caron
2014/10/22
Re: [spctools-discuss] Many potential modifications and X!Tandem : long search duration.
Frédéric DELOLME
2014/10/21
[spctools-discuss] .dat files/waters .raw data files
Maria Jose Martinez
2014/10/21
[spctools-discuss] Can't kill command: no job id passed!
정진선
2014/10/20
Re: [spctools-discuss] does the search using multiple threads for X!tandem affect k-score?
Huoming Zhang
2014/10/20
Re: [spctools-discuss] Re: Encoded charge does not match the assumed_charge
李桂林
2014/10/20
Re: [spctools-discuss] Re: Encoded charge does not match the assumed_charge
李桂林
2014/10/20
[spctools-discuss] Re: Export result data for blast?
zeyu sun
2014/10/20
Re: [spctools-discuss] does the search using multiple threads for X!tandem affect k-score?
David Shteynberg
2014/10/20
[spctools-discuss] does the search using multiple threads for X!tandem affect k-score?
Huoming Zhang
2014/10/20
Re: [spctools-discuss] Many potential modifications and X!Tandem : long search duration.
David Shteynberg
2014/10/20
[spctools-discuss] Many potential modifications and X!Tandem : long search duration.
DELOLME Frederic
2014/10/17
Re: [spctools-discuss] Re: Encoded charge does not match the assumed_charge
David Shteynberg
2014/10/17
Re: [spctools-discuss] Re: Encoded charge does not match the assumed_charge
李桂林
2014/10/16
Re: [spctools-discuss] Re: Encoded charge does not match the assumed_charge
David Shteynberg
2014/10/15
Re: [spctools-discuss] Re: Encoded charge does not match the assumed_charge
李桂林
2014/10/15
Re: [spctools-discuss] Re: Encoded charge does not match the assumed_charge
李桂林
2014/10/15
Re: [spctools-discuss] Re: Encoded charge does not match the assumed_charge
David Shteynberg
2014/10/15
[spctools-discuss] Re: Encoded charge does not match the assumed_charge
李桂林
2014/10/15
[spctools-discuss] Encoded charge does not match the assumed_charge
李桂林
2014/10/10
Re: [spctools-discuss] Export to .xls from command line
钟传奇
2014/10/10
[spctools-discuss] Re: Export to .xls from command line
Adam Oberstein
2014/10/10
Re: [spctools-discuss] How to process MS3 Data from Orbitrap Fusion?
Will Fondrie
2014/10/09
[spctools-discuss] Re: Export to .xls from command line
Adam Oberstein
2014/10/08
Re: [spctools-discuss] iTRAQ data through xtandem! using TPP
Frédéric DELOLME
2014/10/07
Re: [spctools-discuss] Mascot2XML - no enzyme
Jimmy Eng
2014/10/07
[spctools-discuss] Mascot2XML - no enzyme
Vishal Swaroop
2014/10/07
Re: [spctools-discuss] How to process MS3 Data from Orbitrap Fusion?
Will Fondrie
2014/10/07
Re: [spctools-discuss] X!tandem error
zeyu sun
2014/10/06
Re: [spctools-discuss] X!tandem error
Brian Hampton
2014/10/06
[spctools-discuss] Tools for ms1 search using mass, retention time and isotopic pattern
David Zhao
2014/10/06
[spctools-discuss] problem of PeptideProphetParser for large dataset
zeyu sun
2014/10/06
Re: [spctools-discuss] X!tandem error
zeyu sun
2014/10/06
[spctools-discuss] OMSSA and iprophet
zeyu sun
2014/10/06
RE: [spctools-discuss] X!tandem error
Eric Deutsch
2014/10/06
Re: [spctools-discuss] X!tandem error
zeyu sun
2014/10/05
Re: [spctools-discuss] X!tandem error
Jimmy Eng
2014/10/05
[spctools-discuss] X!tandem error
zeyu sun
2014/10/03
Re: [spctools-discuss] How to process MS3 Data from Orbitrap Fusion?
Jimmy Eng
2014/10/03
[spctools-discuss] How to process MS3 Data from Orbitrap Fusion?
Will Fondrie
2014/10/03
[spctools-discuss] FWD: Deprecated CGI endform in tpp_gui.pl caused centos install to fail
Joseph Slagel
2014/10/01
Re: [spctools-discuss] Re: TPP 4.7.0 installation problems on Ubuntu 14.04
Brian Hampton
2014/09/30
[spctools-discuss] why peptideprophet model fails for 2+ peptides?
Ulrich Omasits
2014/09/22
Re: [spctools-discuss] iTRAQ data through xtandem! using TPP
Alberto Labarga
2014/09/19
[spctools-discuss] peptide probability filtering
Kirill Borziak
2014/09/15
Re: [spctools-discuss] PTM prophet and DiMethylation
2kl...@gmail.com
2014/09/04
Re: [spctools-discuss] Wiff file conversion to mzML
钟传奇
2014/09/03
Re: [spctools-discuss] Problems converting wiff files to mzML
Jana Horáková
2014/09/03
Re: [spctools-discuss] Problems converting wiff files to mzML
Robert Winkler
2014/09/03
[spctools-discuss] Problems converting wiff files to mzML
Jana Horáková
2014/09/03
[spctools-discuss] Wiff file conversion to mzML
Jana Horáková
2014/08/29
[spctools-discuss] Re: Libra condition.xml syntax
Konstantinos Vougas
2014/08/28
Re: [spctools-discuss] Libra condition.xml syntax
Luis Mendoza
2014/08/28
[spctools-discuss] Libra condition.xml syntax
Konstantinos Vougas
2014/08/26
Re: [spctools-discuss] PTM prophet and DiMethylation
David Shteynberg
2014/08/26
Re: [spctools-discuss] PTM prophet and DiMethylation
David Shteynberg
2014/08/26
[spctools-discuss] Semi-empirical spectra generation: single aa substitution
Jelena Chuklina
2014/08/22
[spctools-discuss] Sequest search question
David Zhao
2014/08/22
[spctools-discuss] Should I use discriminant score or expect value for PTM modeling for comet search results
David Zhao
2014/08/21
Re: [spctools-discuss] TTP Libra for iTRAQ quantification
SS
2014/08/19
[spctools-discuss] Re: Multiple lysine modifications and quantification
Jesse
2014/08/15
[spctools-discuss] Re: Export to .xls from command line
Adam Oberstein
2014/08/15
[spctools-discuss] Re: Export to .xls from command line
Jason Winget
2014/08/15
Re: [spctools-discuss] Export to .xls from command line
钟传奇
2014/08/15
Re: [spctools-discuss] Export to .xls from command line
钟传奇
2014/08/14
Re: [spctools-discuss] TTP Libra for iTRAQ quantification
Luis Mendoza
2014/08/14
Re: [spctools-discuss] Export to .xls from command line
Luis Mendoza
2014/08/14
Re: [spctools-discuss] TTP Libra for iTRAQ quantification
SS
2014/08/14
Re: [spctools-discuss] Generation of mzIdentML from TPP results
Joseph Slagel
2014/08/12
Re: [spctools-discuss] PTM prophet and DiMethylation
Jesse Meyer
2014/08/12
Re: [spctools-discuss] PTM prophet and DiMethylation
David Shteynberg
2014/08/12
Re: [spctools-discuss] PTM prophet and DiMethylation
Jesse Meyer
2014/08/12
Re: [spctools-discuss] Export to .xls from command line
钟传奇
2014/08/11
[spctools-discuss] Export to .xls from command line
Adam Oberstein
2014/08/08
[spctools-discuss] Re: How to fix message NOCMDFILE
Marianne Brannon
2014/08/06
[spctools-discuss] TPP 4.7 error when performing data search (following tutorial)
Jelena Chuklina
2014/08/04
Re: [spctools-discuss] X!Tandem searches take too long
Joseph Slagel
2014/08/04
[spctools-discuss] How to fix message NOCMDFILE
Marianne Brannon
2014/08/03
[spctools-discuss] How to set iprobility value cutoff input for proteinprophet?
钟传奇
2014/08/01
Re: [spctools-discuss] X!Tandem searches take too long
Marianne Brannon
2014/07/31
Re: [spctools-discuss] X!Tandem searches take too long
Joseph Slagel
2014/07/31
[spctools-discuss] X!Tandem searches take too long
Marianne Brannon
2014/07/28
[spctools-discuss] Re: Possible Bug in TPP 4.7.1
2kl...@gmail.com
2014/07/28
[spctools-discuss] Re: Possible Bug in TPP 4.7.1
dsimpson3
2014/07/27
[spctools-discuss] Attempted to access forbidden directory
SURUCHI AGGARWAL
2014/07/25
[spctools-discuss] Possible Bug in TPP 4.7.1
dsimpson3
2014/07/23
[spctools-discuss] Re: TPP translation code is wrong.
Rachel
2014/07/22
Re: [spctools-discuss] TPP translation code is wrong.
Jimmy Eng
2014/07/22
Re: [spctools-discuss] TPP translation code is wrong.
Luis Mendoza
2014/07/22
Re: [spctools-discuss] Tandem2XML problem (RETURN CODE:768)
Luis Mendoza
2014/07/18
Re: [spctools-discuss] Re: Base peak intensity values not reported in pepxml files
Brian Hampton
2014/07/17
Re: [spctools-discuss] Re: Base peak intensity values not reported in pepxml files
Jimmy Eng
2014/07/17
Re: [spctools-discuss] Re: Base peak intensity values not reported in pepxml files
Brian Hampton
2014/07/17
[spctools-discuss] Re: Base peak intensity values not reported in pepxml files
Jason Winget
2014/07/16
[spctools-discuss] ASAPRatio Problem
Shadab Ahmad
2014/07/16
[spctools-discuss] Base peak intensity values not reported in pepxml files
Brian Hampton
2014/07/15
[spctools-discuss] Re: Spectrast Tier-Wise Scoring
Henry Lam
2014/07/13
[spctools-discuss] Tandem2XML problem (RETURN CODE:768)
zeyu sun
2014/07/12
Re: [spctools-discuss] PTM prophet and DiMethylation
2kl...@gmail.com
2014/07/11
Re: [spctools-discuss] PTM prophet and DiMethylation
David Shteynberg
2014/07/07
Re: [spctools-discuss] ASAPRatio, not using massdiff properly for chemical isotopic labeling?
David Shteynberg
2014/07/07
[spctools-discuss] ProteinProphet crashes by an unknown reason
Lee, Joungmin
2014/07/07
[spctools-discuss] ProteinProphet crashes
Lee, Joungmin
2014/07/07
[spctools-discuss] ASAPRatio problem update - is fixed in TPP 4.7.1 !
Brian Hampton
2014/07/06
[spctools-discuss] ASAPRatio, not using massdiff properly for chemical isotopic labeling?
Brian Hampton
2014/07/04
Re: [spctools-discuss] HOW to get the "Specify Tandem Parameters File"?~~~help~~~
jason cao
2014/07/04
Re: [spctools-discuss] HOW to get the "Specify Tandem Parameters File"?~~~help~~~
钟传奇
2014/07/03
[spctools-discuss] HOW to get the "Specify Tandem Parameters File"?~~~help~~~
jason cao
2014/07/03
[spctools-discuss] what is "Specify Tandem Parameters File"!!!!
jason cao
2014/07/03
[spctools-discuss] how to creat a " Specify Tandem Parameters File "!!!!!!!! hurry~~~help
jason cao
2014/07/02
Re: [spctools-discuss] [PeptideProphet] limitation of input file size?
User
2014/07/02
Re: [spctools-discuss] [PeptideProphet] limitation of input file size?
Joseph Slagel
2014/07/02
Re: [spctools-discuss] [PeptideProphet] limitation of input file size?
User
2014/07/02
Re: [spctools-discuss] [PeptideProphet] limitation of input file size?
Joseph Slagel
2014/07/02
[spctools-discuss] [PeptideProphet] limitation of input file size?
User
2014/07/01
[spctools-discuss] [PeptideProphet_Mascot] Runtime to terminate it in an unusual way.
User
2014/07/01
[spctools-discuss] PTM prophet and DiMethylation
Oded
2014/06/30
[spctools-discuss] TPP translation code is wrong.
Rachel
2014/06/26
Re: [spctools-discuss] PeptideProphet Libra analysis return code 65280
Luis Mendoza
2014/06/24
Re: [spctools-discuss] Re: TPP 4.7.0 installation problems on Ubuntu 14.04
Joseph Slagel
2014/06/24
Re: [spctools-discuss] Re: TPP 4.7.0 installation problems on Ubuntu 14.04
Robert Winkler
2014/06/23
Re: [spctools-discuss] Re: TPP 4.7.0 installation problems on Ubuntu 14.04
Joseph Slagel
Earlier messages
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