The files generated by TPP belongs to www-data and has 666 permission. I chmod -R 777 the whole folder, still get the same thing.
Huan On Apr 13, 1:37 pm, Joseph Slagel <[email protected]> wrote: > Huan, > > What is the actual path and file permisions to the pep.shtml and prot.shtml > files on your system? > > -Joe > > On Mon, Apr 11, 2011 at 10:42 AM, Huan Wang <[email protected]> wrote: > > Hi, > > > I installed TPP v4.4 VUVUZELA rev 1, Build 201101181419 (linux) on > > Ubuntu 10.04-64bit. After running the tutorial data (raft5051) in > > peptide prophet, I got "Command Successful" message. However, when I > > click the link of output shtml, I got "404 Not Found, The requested > > URL /data/testinteract.pep.xml was not found on this server". I > > checked the path and both pep.shtml and prot.shtml are there. There > > are also corresponding .xml and .xsl files. I can open the generated > > pep.xml file but not prot.xml files (same error). > > > My guess is I did not set up apache2 correctly because another copy of > > TPP runs on Windows can display the result without problem. > > > My apache2 setting is: /etc/apache2/sites-available/mytpp: > > SetEnv WEBSERVER_ROOT /usr/local/tpp > > # directory to store data for web browser viewing > > ScriptAlias /tpp/data "/usr/local/tpp/data" > > <Directory "/usr/local/tpp/data"> > > AllowOverride None > > Options Indexes FollowSymLinks Includes > > Order allow,deny > > Allow from all > > </Directory> > > > My /usr/local/tpp/cgi-bin/tpp_gui setting is > > > my $www_root = readconfig('www_root',$ENV{'WEBSERVER_ROOT'}.'/'); > > # full path to web server root > > my $data_dir = readconfig('data_dir',"${www_root}data/"); > > > They matched to each other. I also tried to change the path to /usr/ > > local/tpp/ISB/data, but got the same thing. > > > Can anyone help me out? Thanks > > > Huan > > > -- > > You received this message because you are subscribed to the Google Groups > > "spctools-discuss" group. > > To post to this group, send email to [email protected]. > > To unsubscribe from this group, send email to > > [email protected]. > > For more options, visit this group at > >http://groups.google.com/group/spctools-discuss?hl=en. -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
