hey joe,
thanks for picking up the issue!
the problem constantly appeared for some test data i have (orbitrap data).
the files i use contain around 11-13k spectra and have around 5000
identifications on 1%FDR.
i will send you the according file in a separate mail.
cheers,
andreas
On 11/11/11 1:12 AM, Joseph Slagel wrote:
Ah, yes sorry about that. Gmail autofill error.
On Thu, Nov 10, 2011 at 4:12 PM, Joseph Slagel
<[email protected]
<mailto:[email protected]>> wrote:
Andreas,
Before we close out 4.5.1 I wanted to follow up with you again on
this issue you reported. Is there any additional information you
can provide? Maybe the tandem file? Are there a large number of
expected identifications?
Thanks
On Sun, Oct 23, 2011 at 3:59 AM, Andreas Quandt
<[email protected] <mailto:[email protected]>> wrote:
dear experts,
i run into problem if converting tandem results to pep.xml. i
use an
internal standard data set which were processed without
problems using
the tpp 4.4.1
however if i use the new version 4.5.0, only 2 out of 4 files
are converted.
maybe one of you can interpret the error message i receive:
[quandtan@brutus2 interact_tandem]$ Tandem2XML
/cluster/work/scr3/quandtan/workflow/532/0/2/tandem/tandem.result
/cluster/work/scr3/quandtan/workflow/532/0/2/tandem2xml/tandem2xml.pepxml
terminate called after throwing an instance of 'std::out_of_range'
what(): vector::_M_range_check
Aborted
many thanks in advance!
cheers,
andreas
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