Hi All Sorry if this is a noob question, I'm looking at Mass Spec. data from an IT/database point of view and am struggling a little with the specific terms which may well mean the answer I want is already here somewhere - I just can't find it!!!
So, if I take a file from a Thermo Mass Spec and convert it to mzml using msconvert, I get all the scans and all the data from the RAW file. If i take the same file and use msconvert to create a MGF file, I appear to get level 2 scans only running a command with the switch as below, the resulting file is empty --filter "msLevel 1" Is this by design? I want a file that looks like the MGF but has all the scan data like the mzml All help and guidance, much appreciated unless it's RTFM because I've tried that :-) Cheers Chris -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
