Hi,

We're getting the following error when running tandem2xml from the
command line using TPP v4.1 (Petunia):

============
R:\programs\windows_programs\tpp-bin\tandem2xml.exe Ylhu-
Fr2_9.xtandem.xml jGa6-Ylhu-Fr2_9.pep.xml
No index list offset found. Reading this file will be painfully slow.
terminate called after throwing an instance of 'std::out_of_range'
  what():  vector::_M_range_check

This application has requested the Runtime to terminate it in an
unusual way.
Please contact the application's support team for more information.

============

Any clues?

In case it helps, here are some more details:

1) We searched about 40+ mzXML files (genereated originall from ABI
wiff files using msconvert) via X!Tandem and then converted them using
the above tandem2xml program. All 40+ xtandem xml files seemed to
convert except for one which gave the error above....
2) The experiment was an ITRAQ 4-channel experiment
3) The TPP programs are running under Windows

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