No I don't think isolation width is representable in mzXML except perhaps with the pseudo-CV
mechanism which pwiz/msconvert doesn't support for mzXML. You probably want to switch to mzML. It
has a considerably richer metadata model, including isolation width.
-Matt
On 8/21/2012 11:15 AM, wlstraube wrote:
Hello Matt,
We got it to work now, taking a detour but it works fine now. It was more a
problem reading the
mzXML files and then ignoring certain things.
However, I have one more question: Where is in the latest format of mzXML the
isolation width of the
precursor stored (set in the method of the instrument) ?
I was not able to find it. Is it stored at all ? (I found some old discussions,
that it was not the
case for previous versions).
Please understand, that I am currently not able to provide you with a data
file, I would probably
get in trouble....
Best regards,
Werner
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