Hi, I was wondering if anyone could help me or offer any suggestions towards issues I have been having with TPP software. I have been trying to build a spectral library from data gathered on a Q-Tof Mass Spectrometer from crude synthesised phosphorylated peptides. Although I am able to see the peptides when analysing the data using PEAKS softwar, they do not appear in the final library built using TPP when I import it into Skyline (MacCoss lab). I don't understand if this is a problem with TPP or Skyline or the fact that I am trying to find phosphorylated peptides and am possibly missing an extra step in the TPP pipeline.
I would really appreciate any help or advice with this issue! Thanks, Claire Tonry (MRes) Conway Institute of Biomedical and Biomolecular Science -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss?hl=en. For more options, visit https://groups.google.com/groups/opt_out.
