Hi all I have a non-quantitative LC-MS/MS data set that comes from a co-inoculation fermentation experiment with two yeast species. I would like to identify what proteins are present in this sample, realising that there will be proteins present from both yeast.
Is there any reason why I can't simply merge the proteome fastas into one fasta, create a decoy database, and then run it through the TPP? Thank you in advance Armin Geiger Msc Student University of Stellenbosch, South Africa -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss?hl=en. For more options, visit https://groups.google.com/groups/opt_out.
