I didn't remove the old files...not my brightest moment. I will do that and then do a fresh clean install and make the mods you have made and let you know, although I may only be able to email the results tomorrow sometime.
Thank you for all your help though it's helping me NOT beat my head against a brick wall! On 21 April 2013 20:04, Ross <[email protected]> wrote: > That's a shame. Did you completely remove all the old TPP files in between > installs? > > The only difference I can see between our installs at the moment, is that > I removed the space in my variable assignment, between '=' and '/usr'... > What I will do is list all the things I did that were worth writing down > (i.e. differed from the install guide...), and hope it helps: > > Install pre-req that wasn't listed: > *# apt-get install libgd2-xpm-dev* > * > * > *After install, when configuring Apache* > * > > # chown -R www-data:www-data /usr/local/tpp/ > > # chmod -R 711 /usr/local/tpp/ > # chmod -R a+X /usr/local/tpp/** > * > > Does this help at all? > > On Sunday, April 21, 2013 6:44:14 PM UTC+1, Liam Bell wrote: > >> Nope - no dice... >> >> Changed the PERL_LIB_CORE= /usr/lib/perl/15.4.2/CORE in the >> makefile.conf.incl file before re-running the compiling/building. >> >> Ran through the rest fo the steps from http://tools.** >> proteomecenter.org/wiki/index.**php?title=TPP_4.5.2:_** >> Installing_on_Ubuntu_10.04.3<http://tools.proteomecenter.org/wiki/index.php?title=TPP_4.5.2:_Installing_on_Ubuntu_10.04.3> >> **as I have done successfully before. >> >> The server is working still (localhost => It works!) but I can't load up >> http://localhost/tpp/cgi-**bin/tpp_gui.pl<http://localhost/tpp/cgi-bin/tpp_gui.pl> >> - >> still getting "The requested URL /tpp/cgi-bin/tpp_gui.pl was not found >> on this server." >> >> Any other ideas? >> >> >> On 21 April 2013 19:10, Ross <[email protected]> wrote: >> >>> Hi Liam, >>> I set mine to /usr/lib/perl/5.14/CORE, but using 5.14.2 shouldn't make a >>> difference, since the 5.14 folder is a symlink to 5.14.2. >>> >>> Yes, I would do that. Let's hope this is the fix. >>> >>> On Sunday, April 21, 2013 6:02:16 PM UTC+1, Liam Bell wrote: >>> >>>> Hi Ross, >>>> >>>> Here you go: >>>> PERL_LIB_CORE= /usr/lib/perl/5.10/CORE/ >>>> >>>> The CORE folder does exist at /usr/lib/perl/5.14.2/CORE. >>>> >>>> Should I recompile and change that variable before I do? >>>> >>>> >>>> On 21 April 2013 18:05, Ross <[email protected]> wrote: >>>> >>>>> Hm. In your Makefile.config.incl, what is your PERL_LIB_CORE variable >>>>> ? Does the version of Perl in that variable match the version installed on >>>>> your computer? (command line: $ perl --version) >>>>> >>>>> To test if the variable is viable, I navigated down the path of the >>>>> variable in the terminal to see if the CORE folder actually existed. If I >>>>> remember correctly I had to change the variable. >>>>> >>>>> Let me know if that yields something, and I'll get on my TPP >>>>> computer to find out what I did. >>>>> >>>>> On Sunday, April 21, 2013 4:56:08 PM UTC+1, Liam Bell wrote: >>>>> >>>>>> It was set to root but I changed it to your settings and restarted >>>>>> apache but still not working... >>>>>> >>>>>> It's rather vexing! >>>>>> >>>>>> >>>>>> On 21 April 2013 17:24, Ross <[email protected]> wrote: >>>>>> >>>>>>> Hi Liam, >>>>>>> >>>>>>> I'm sorry this hasn't helped. I've cross checked the TPP entries of >>>>>>> our two httpd.conf files (the one you posted above) and they are >>>>>>> identical. >>>>>>> >>>>>>> Alternatively it could be your permissions. For the entire >>>>>>> /usr/local/tpp folder I have ownership set to apache (www-data) and >>>>>>> permissions as drwxr-xr-x. >>>>>>> >>>>>>> Does this help? >>>>>>> >>>>>>> R >>>>>>> >>>>>>> On Sunday, April 21, 2013 3:55:55 PM UTC+1, Liam Bell wrote: >>>>>>> >>>>>>>> Hi Ross, >>>>>>>> >>>>>>>> Thanks for the tip but it hasn't helped, would you be able to post >>>>>>>> the contents of your httpd.conf file for me so I can make sure it is >>>>>>>> the >>>>>>>> same as what I currently have? >>>>>>>> >>>>>>>> Thanks, >>>>>>>> Liam >>>>>>>> >>>>>>>> >>>>>>>> On 21 April 2013 10:43, Ross <[email protected]> wrote: >>>>>>>> >>>>>>>>> Bear in mind that in some httpd.conf files there is a dedicated >>>>>>>>> section for this: ### Section 3: Virtual Hosts >>>>>>>>> >>>>>>>>> On Sunday, 21 April 2013 09:42:29 UTC+1, Ross wrote: >>>>>>>>>> >>>>>>>>>> Hi all, >>>>>>>>>> >>>>>>>>>> I encountered this issue myself on Ubuntu 12.04: I found that >>>>>>>>>> making the tpp.4.6.2 file in /etc/apache2/sites-available didn't work >>>>>>>>>> either. >>>>>>>>>> >>>>>>>>>> Instead, I found the following solved the issue: >>>>>>>>>> >>>>>>>>>> - Paste the contents of the tpp-x.y.z file into >>>>>>>>>> /etc/apache2/httpd.conf >>>>>>>>>> >>>>>>>>>> This definitely worked for me. I'm by no means an expert on >>>>>>>>>> Apache, however. >>>>>>>>>> >>>>>>>>>> Hope this helps, >>>>>>>>>> Ross >>>>>>>>>> >>>>>>>>>> On Thursday, 21 March 2013 13:19:31 UTC, raju wrote: >>>>>>>>>>> >>>>>>>>>>> Hi, >>>>>>>>>>> I hope you can help. >>>>>>>>>>> I've been trying to install TPP on a linux vm, specifically >>>>>>>>>>> Ubuntu 12.04 LTS in virtual box. >>>>>>>>>>> >>>>>>>>>>> I've been following the TPP installation guide on http://tools.* >>>>>>>>>>> *proteomecenter********.org/wiki/index.**php?title=TPP_******** >>>>>>>>>>> 4.5.2:_**Installing_on_Ubuntu_**10******.04.3<http://tools.proteomecenter.org/wiki/index.php?title=TPP_4.5.2:_Installing_on_Ubuntu_10.04.3> >>>>>>>>>>> . >>>>>>>>>>> >>>>>>>>>>> I've been copying and pasting where possible and it looked like >>>>>>>>>>> everything was working during the setup i.e. no error messages. >>>>>>>>>>> >>>>>>>>>>> However when i go to my web browser, google chrome, and go to >>>>>>>>>>> http://localhost/tpp/cgi-**bi********n/tpp_gui.pl<http://localhost/tpp/cgi-bin/tpp_gui.pl> >>>>>>>>>>> >>>>>>>>>>> I get the following error: >>>>>>>>>>> >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ---------------------------- >>>>>>>>>>> Not Found >>>>>>>>>>> >>>>>>>>>>> The requested URL /tpp/cgi-bin/tpp_gui.pl was not found on this >>>>>>>>>>> server. >>>>>>>>>>> >>>>>>>>>>> Apache/2.2.22 (Ubuntu) Server at localhost Port 80 >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ---------------------------- >>>>>>>>>>> >>>>>>>>>>> Apache is working, as i can see the page. >>>>>>>>>>> I've checked port 80 is free >>>>>>>>>>> I've ensured the firewall has been disabled - just in case. >>>>>>>>>>> >>>>>>>>>>> When I look in to the apache error log: >>>>>>>>>>> The following errors were recorded: >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ---------------------------- >>>>>>>>>>> [Thu Mar 21 13:01:06 2013] [error] [client 127.0.0.1] File does >>>>>>>>>>> not exist: /var/www/tpp >>>>>>>>>>> [Thu Mar 21 13:01:06 2013] [error] [client 127.0.0.1] File does >>>>>>>>>>> not exist: /var/www/favicon.ico >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ---------------------------- >>>>>>>>>>> >>>>>>>>>>> I've checked that the file >>>>>>>>>>> /etc/apache2/sites-**availa********ble/tpp-x.y.z >>>>>>>>>>> is as described in the installation guide >>>>>>>>>>> >>>>>>>>>>> The file exists in the path stated and I copied and pasted the >>>>>>>>>>> text into the file to avoid typos. >>>>>>>>>>> >>>>>>>>>>> Any help would be greatly appreciated!!! >>>>>>>>>>> >>>>>>>>>>> Many thanks, >>>>>>>>>>> Raj >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> -- >>>>>>>>> You received this message because you are subscribed to a topic in >>>>>>>>> the Google Groups "spctools-discuss" group. >>>>>>>>> To unsubscribe from this topic, visit https://groups.google.com/d/ >>>>>>>>> **to******pic/spctools-discuss/**pzyzzSmoB****** >>>>>>>>> xY/unsubscribe?hl=en<https://groups.google.com/d/topic/spctools-discuss/pzyzzSmoBxY/unsubscribe?hl=en> >>>>>>>>> . >>>>>>>>> To unsubscribe from this group and all its topics, send an email >>>>>>>>> to spctools-discu...@**googlegroups******.com. >>>>>>>>> To post to this group, send email to spctools...@googlegroups.** >>>>>>>>> com. >>>>>>>>> >>>>>>>>> Visit this group at http://groups.google.com/**group****** >>>>>>>>> /spctools-discuss?hl=en<http://groups.google.com/group/spctools-discuss?hl=en> >>>>>>>>> . >>>>>>>>> For more options, visit https://groups.google.com/**grou****** >>>>>>>>> ps/opt_out <https://groups.google.com/groups/opt_out>. >>>>>>>>> >>>>>>>>> >>>>>>>>> >>>>>>>> >>>>>>>> >>>>>>> On Sunday, April 21, 2013 3:55:55 PM UTC+1, Liam Bell wrote: >>>>>>> >>>>>>>> Hi Ross, >>>>>>>> >>>>>>>> Thanks for the tip but it hasn't helped, would you be able to post >>>>>>>> the contents of your httpd.conf file for me so I can make sure it is >>>>>>>> the >>>>>>>> same as what I currently have? >>>>>>>> >>>>>>>> Thanks, >>>>>>>> Liam >>>>>>>> >>>>>>>> >>>>>>>> On 21 April 2013 10:43, Ross <[email protected]> wrote: >>>>>>>> >>>>>>>>> Bear in mind that in some httpd.conf files there is a dedicated >>>>>>>>> section for this: ### Section 3: Virtual Hosts >>>>>>>>> >>>>>>>>> On Sunday, 21 April 2013 09:42:29 UTC+1, Ross wrote: >>>>>>>>>> >>>>>>>>>> Hi all, >>>>>>>>>> >>>>>>>>>> I encountered this issue myself on Ubuntu 12.04: I found that >>>>>>>>>> making the tpp.4.6.2 file in /etc/apache2/sites-available didn't work >>>>>>>>>> either. >>>>>>>>>> >>>>>>>>>> Instead, I found the following solved the issue: >>>>>>>>>> >>>>>>>>>> - Paste the contents of the tpp-x.y.z file into >>>>>>>>>> /etc/apache2/httpd.conf >>>>>>>>>> >>>>>>>>>> This definitely worked for me. I'm by no means an expert on >>>>>>>>>> Apache, however. >>>>>>>>>> >>>>>>>>>> Hope this helps, >>>>>>>>>> Ross >>>>>>>>>> >>>>>>>>>> On Thursday, 21 March 2013 13:19:31 UTC, raju wrote: >>>>>>>>>>> >>>>>>>>>>> Hi, >>>>>>>>>>> I hope you can help. >>>>>>>>>>> I've been trying to install TPP on a linux vm, specifically >>>>>>>>>>> Ubuntu 12.04 LTS in virtual box. >>>>>>>>>>> >>>>>>>>>>> I've been following the TPP installation guide on http://tools.* >>>>>>>>>>> *proteomecenter********.org/wiki/index.**php?title=TPP_******** >>>>>>>>>>> 4.5.2:_**Installing_on_Ubuntu_**10******.04.3<http://tools.proteomecenter.org/wiki/index.php?title=TPP_4.5.2:_Installing_on_Ubuntu_10.04.3> >>>>>>>>>>> . >>>>>>>>>>> >>>>>>>>>>> I've been copying and pasting where possible and it looked like >>>>>>>>>>> everything was working during the setup i.e. no error messages. >>>>>>>>>>> >>>>>>>>>>> However when i go to my web browser, google chrome, and go to >>>>>>>>>>> http://localhost/tpp/cgi-**bi********n/tpp_gui.pl<http://localhost/tpp/cgi-bin/tpp_gui.pl> >>>>>>>>>>> >>>>>>>>>>> I get the following error: >>>>>>>>>>> >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ---------------------------- >>>>>>>>>>> Not Found >>>>>>>>>>> >>>>>>>>>>> The requested URL /tpp/cgi-bin/tpp_gui.pl was not found on this >>>>>>>>>>> server. >>>>>>>>>>> >>>>>>>>>>> Apache/2.2.22 (Ubuntu) Server at localhost Port 80 >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ---------------------------- >>>>>>>>>>> >>>>>>>>>>> Apache is working, as i can see the page. >>>>>>>>>>> I've checked port 80 is free >>>>>>>>>>> I've ensured the firewall has been disabled - just in case. >>>>>>>>>>> >>>>>>>>>>> When I look in to the apache error log: >>>>>>>>>>> The following errors were recorded: >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ---------------------------- >>>>>>>>>>> [Thu Mar 21 13:01:06 2013] [error] [client 127.0.0.1] File does >>>>>>>>>>> not exist: /var/www/tpp >>>>>>>>>>> [Thu Mar 21 13:01:06 2013] [error] [client 127.0.0.1] File does >>>>>>>>>>> not exist: /var/www/favicon.ico >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ------------------------------********** >>>>>>>>>>> ---------------------------- >>>>>>>>>>> >>>>>>>>>>> I've checked that the file >>>>>>>>>>> /etc/apache2/sites-**availa********ble/tpp-x.y.z >>>>>>>>>>> is as described in the installation guide >>>>>>>>>>> >>>>>>>>>>> The file exists in the path stated and I copied and pasted the >>>>>>>>>>> text into the file to avoid typos. >>>>>>>>>>> >>>>>>>>>>> Any help would be greatly appreciated!!! >>>>>>>>>>> >>>>>>>>>>> Many thanks, >>>>>>>>>>> Raj >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> -- >>>>>>>>> You received this message because you are subscribed to a topic in >>>>>>>>> the Google Groups "spctools-discuss" group. >>>>>>>>> To unsubscribe from this topic, visit https://groups.google.com/d/ >>>>>>>>> **to******pic/spctools-discuss/**pzyzzSmoB****** >>>>>>>>> xY/unsubscribe?hl=en<https://groups.google.com/d/topic/spctools-discuss/pzyzzSmoBxY/unsubscribe?hl=en> >>>>>>>>> . >>>>>>>>> To unsubscribe from this group and all its topics, send an email >>>>>>>>> to spctools-discu...@**googlegroups******.com. >>>>>>>>> To post to this group, send email to spctools...@googlegroups.** >>>>>>>>> com. >>>>>>>>> >>>>>>>>> Visit this group at http://groups.google.com/**group****** >>>>>>>>> /spctools-discuss?hl=en<http://groups.google.com/group/spctools-discuss?hl=en> >>>>>>>>> . >>>>>>>>> For more options, visit https://groups.google.com/**grou****** >>>>>>>>> ps/opt_out <https://groups.google.com/groups/opt_out>. >>>>>>>>> >>>>>>>>> >>>>>>>>> >>>>>>>> >>>>>>>> -- >>>>>>> You received this message because you are subscribed to a topic in >>>>>>> the Google Groups "spctools-discuss" group. >>>>>>> To unsubscribe from this topic, visit https://groups.google.com/d/** >>>>>>> to****pic/spctools-discuss/**pzyzzSmoB****xY/unsubscribe?hl=en<https://groups.google.com/d/topic/spctools-discuss/pzyzzSmoBxY/unsubscribe?hl=en> >>>>>>> . >>>>>>> To unsubscribe from this group and all its topics, send an email to >>>>>>> spctools-discu...@**googlegroups****.com. >>>>>>> To post to this group, send email to spctools...@googlegroups.**com. >>>>>>> Visit this group at http://groups.google.com/**group**** >>>>>>> /spctools-discuss?hl=en<http://groups.google.com/group/spctools-discuss?hl=en> >>>>>>> . >>>>>>> For more options, visit https://groups.google.com/**grou**** >>>>>>> ps/opt_out <https://groups.google.com/groups/opt_out>. >>>>>>> >>>>>>> >>>>>>> >>>>>> >>>>>> -- >>>>> You received this message because you are subscribed to a topic in the >>>>> Google Groups "spctools-discuss" group. >>>>> To unsubscribe from this topic, visit https://groups.google.com/d/**to >>>>> **pic/spctools-discuss/**pzyzzSmoB**xY/unsubscribe?hl=en<https://groups.google.com/d/topic/spctools-discuss/pzyzzSmoBxY/unsubscribe?hl=en> >>>>> . >>>>> To unsubscribe from this group and all its topics, send an email to >>>>> spctools-discu...@**googlegroups**.com. >>>>> To post to this group, send email to spctools...@googlegroups.**com. >>>>> Visit this group at http://groups.google.com/**group** >>>>> /spctools-discuss?hl=en<http://groups.google.com/group/spctools-discuss?hl=en> >>>>> . >>>>> For more options, visit >>>>> https://groups.google.com/**grou**ps/opt_out<https://groups.google.com/groups/opt_out> >>>>> . >>>>> >>>>> >>>>> >>>> >>>> -- >>> You received this message because you are subscribed to a topic in the >>> Google Groups "spctools-discuss" group. >>> To unsubscribe from this topic, visit https://groups.google.com/d/** >>> topic/spctools-discuss/**pzyzzSmoBxY/unsubscribe?hl=en<https://groups.google.com/d/topic/spctools-discuss/pzyzzSmoBxY/unsubscribe?hl=en> >>> . >>> To unsubscribe from this group and all its topics, send an email to >>> spctools-discu...@**googlegroups.com. >>> To post to this group, send email to spctools...@googlegroups.**com. >>> Visit this group at http://groups.google.com/** >>> group/spctools-discuss?hl=en<http://groups.google.com/group/spctools-discuss?hl=en> >>> . >>> For more options, visit >>> https://groups.google.com/**groups/opt_out<https://groups.google.com/groups/opt_out> >>> . >>> >>> >>> >> >> -- > You received this message because you are subscribed to a topic in the > Google Groups "spctools-discuss" group. > To unsubscribe from this topic, visit > https://groups.google.com/d/topic/spctools-discuss/pzyzzSmoBxY/unsubscribe?hl=en > . > To unsubscribe from this group and all its topics, send an email to > [email protected]. > To post to this group, send email to [email protected]. > Visit this group at http://groups.google.com/group/spctools-discuss?hl=en. > For more options, visit https://groups.google.com/groups/opt_out. > > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss?hl=en. For more options, visit https://groups.google.com/groups/opt_out.
