On Friday, March 8, 2013 10:33:43 AM UTC+1, Francesco Mancuso wrote: > > Dear list, > I have a "problem" showing MSMS spectra with Lorikeet. > I am using the 4.6.1 version of TPP in a linux web server. > > In the PepXML page the links of IONS2 make use of the plot-msms-js.cgi > script and point to a folder in which in theory there are all the dta and > out files. > Using Mascot2XML tool you can convert the .dat Mascot file into PepXML and > generate or not (according to -notgz option) a tgz file that contains the > info for Lorikeet. For what I saw I cannot find an automatic way to > uncompress the tgz file into the folder pointed by Lorikeet. Is this > normal? > To see the spectra I have always to manually uncompress the tgz files? > > Many thanks for the help, > Francesco > > PS I have already modified the http.conf file with the ISB alias. > > -- > > *Francesco Mattia Mancuso* > Bioinformatician > > - Proteomics Core Facility > > CRG-Centre for Genomic Regulation > C/ Dr. Aiguader, 88 (Edif. PRBB) > 08003 Barcelona, Spain > > Mail: [email protected] <javascript:> > Phone: +34 933160869 >
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