Hi Jason, Not sure but this might help https://groups.google.com/forum/#!topic/spctools-discuss/QSUZQ3ViRoQ
Thanks On Wed, Apr 2, 2014 at 5:55 AM, jason cao <[email protected]> wrote: > I am struggling to make TPP 4.7 working in Windows 8. > > I am follow the description of " Quick Start to data analysis > using the TPP"（ > http://tools.proteomecenter.org/wiki/index.php?title=TPP_Tutorial）.Step1 > - step5 is Ok！ Mistakes is happen in step6 ---Validation of > Peptide-Spectrum assignments with PeptideProphet. > > When i *Run XInteract.*The commends finished immediately,and > showed *Command FAILED *RETURN CODE:256. > > Next is the advice and the context of failed commends : > > (I have set the environment variable to my computer,the outcme still > wrong.Plz help me ,thank you ! ) > > running: "C:/Inetpub/tpp-bin/InteractParser "interact.pep.xml" > "OR20080317_S_SILAC-LH_1-1_01.tandem.pep.xml" > "OR20080320_S_SILAC-LH_1-1_11.tandem.pep.xml" -L"7"" > > *<PRE> Environment variable WEBSERVER_ROOT does not exist. > > For Windows users, you can set this environment variable > through the Advanced tab under System Properties when you > right-mouse-click on your My Computer icon. > > Set this environment variable to your webserver's document > root directory such as c:\inetpub\wwwroot for IIS or > c:\website\htdocs or WebSite Pro. > > Exiting. > command completed in 1.39643e+009 sec > > running: "C:/Inetpub/tpp-bin/DatabaseParser "interact.pep.xml"" > pipe "C:/Inetpub/tpp-bin/DatabaseParser "interact.pep.xml"" failed: No error > error, could not execute: C:/Inetpub/tpp-bin/DatabaseParser "interact.pep.xml" > > command "c:\Inetpub\tpp-bin\xinteract -Ninteract.pep.xml -p0.05 -l7 -OA > OR20080317_S_SILAC-LH_1-1_01.tandem.pep.xml > OR20080320_S_SILAC-LH_1-1_11.tandem.pep.xml" failed: Operation not permitted* > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at http://groups.google.com/group/spctools-discuss. > For more options, visit https://groups.google.com/d/optout. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
